Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2655 |
Symbol | |
ID | 6244138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2995672 |
End bp | 2996970 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642594445 |
Product | type II secretion system protein E |
Protein accession | YP_001858873 |
Protein GI | 186477403 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.488787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGC CGTCATTTCT ACAGGCGGCC CTCAGCCGGT ATTCGATGCG CACCCCTTCC AACACTGCCA CGCCTGCGCC CAGCGTCGCC GCGAACACGC CGTCGCTTCA ATCCGTCACG TCAGACGCCG ACAGCCCGCC CGCCGTCCGC CTCCTGTCCG GCACGCTGCA GGAAGCGGCG CGCCGCAATG CATCCGACCT GCACATCGAG CCGATGGAGC ACGGCTGGCG AATGCGTCTG CGTGTCGATG GTGTACTGCA CGAACTGGCG CGCCCGCCCG TCCATCTACG TGACGCTTTC ATCACGCGCG TGAAAGTGCT GGCGCGCATG GATATCGCAG AACGGCGCGT GCCCCAGGAC GGCCGCTTGC GCCTGCCCGT GACGGCGGGC CGCGTCGAAG ACTACCGCGT GAATTCGCTG CCCACGCTGT TCGGGGAGAA GCTCGTGCTG CGGCGGCTCG AAGCGCTGCC CGCCGATCTG TCGCTCGATT CGCTCGGACT CGCGCCCGGG CAGCGCGACA TCGTGGACCG GTCGATCCGC TCGCCGCATG GGCTCGTGCT CGTCACAGGT CCGACGGGCA GCGGCAAAAC GATGTCGCTG TACTGCTTCC TGCAACTGTT GAACTGCGGT TCGCGCAATC TCTGCTCGGT CGAAGATCCT GCCGAAATCC AGCTCGCGGG CGTCAATCAG GTCAGCGTGC GCGAGAAGGC GGGGCTGACG TTTGCCGTCG CGCTTCGCGC GTTCCTTCGT CAGGATCCCG ACGTCATCAT GGTCGGTGAA ATCCGCGACG AAGAAACGGC CGACGTCGCC GTCAAAGCGG CTCAAACCGG GCATCTGGTG CTGTCGACGC TACACACGAA CGACGCGCCG GCCGCCATCG CGCGTCTGAT CGACATCGGC GTCGAACCGT ATAACCTCGC GGCGGCGCTG CGTCTCGTCA CGGCGCAGCG GCTCGTGCGG CGTCTGTGTT CGAGGTGCAA ACAACATGCG GCAGAAACAC ACGCGTCGTT GCGCTCGGCT GGCGTGCCCG ACGATCAGCT CGCGCAGTGG CATCCCTACG CTCCATGCGG ATGCGAAGCG TGTCATGGCA TCGGCTTTCG CGGACGGGTC GGCATCCATC AGGTCATGCC GATCTCCGAT GCAATGCGCG AACTCATCGT CGCTCGCGCC GGTACACACG AGCTCGCTCG ACAGGCGCAG GCCGAACGCG TGCAGACATT GCGCGAAGCC GCGCTCGCCC GTGCTTTCGA CGGCACGACG AGTCTGGCCG AAGCATCGAG CGCAACGGAG GTTGCATGA
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Protein sequence | MMKPSFLQAA LSRYSMRTPS NTATPAPSVA ANTPSLQSVT SDADSPPAVR LLSGTLQEAA RRNASDLHIE PMEHGWRMRL RVDGVLHELA RPPVHLRDAF ITRVKVLARM DIAERRVPQD GRLRLPVTAG RVEDYRVNSL PTLFGEKLVL RRLEALPADL SLDSLGLAPG QRDIVDRSIR SPHGLVLVTG PTGSGKTMSL YCFLQLLNCG SRNLCSVEDP AEIQLAGVNQ VSVREKAGLT FAVALRAFLR QDPDVIMVGE IRDEETADVA VKAAQTGHLV LSTLHTNDAP AAIARLIDIG VEPYNLAAAL RLVTAQRLVR RLCSRCKQHA AETHASLRSA GVPDDQLAQW HPYAPCGCEA CHGIGFRGRV GIHQVMPISD AMRELIVARA GTHELARQAQ AERVQTLREA ALARAFDGTT SLAEASSATE VA
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