Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2653 |
Symbol | |
ID | 6244136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2993037 |
End bp | 2994029 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642594442 |
Product | polyprenyl synthetase |
Protein accession | YP_001858871 |
Protein GI | 186477401 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00415418 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCAA CCGCCACCCC AACCCCCAAC GCAGCCAATC TGCTCGCTCC GATCGCCGAA GACATGCAGC AGGTGAATCG CGTGATCCGG CACCGCCTGG CGTCGGAAGT GATGCTGATC AACCAGATCT CCGAGTACAT CATCAGTGCC GGGGGCAAGC GTCTGCGGCC CGCGCTGCTC CTGCTCGTGG CGGGGGCGCT CGGTGACCGG ACGGGGTACC GGCACGAACT GGCGGCCGTC GTCGAGTTCA TCCATACGGC TACGCTGCTG CACGACGACG TCGTCGACGA ATCCGACCTG CGTCGCGGCC GGCAGACCGC TAACGCGCTG TTCGGCAACG CGGCCAGTGT GCTGGTCGGC GACTTCCTGT ATTCGCGCTC CTTCCAGATG ATGGTCGGCG TTGGCAAGAT GCGCGTGATG GAGATTCTTT CGGAAGCGAC CAACATCATT TCCGAAGGCG AGGTGCTGCA ACTGCTGAAC ATGCATGACG CCGACGTCGA CGAAGCGCGT TACATGCAGG TGATCCGCTA CAAGACGGCC AAGCTGTTCG AGGCCGCCGC CCAGCTGGGC GCGGTGCTGT CAGGAGCCGA CGCGACCACG GAAGCCGCCG CGGCAGAGTT CGGCCGCCGC ATCGGTACGG CCTTCCAGAT CATGGACGAC TGGCTCGACT ACACCGGCAC GCCGGAATCG ATGGGCAAGA ACGCCGGCGA CGATCTGCGC GAAGGCAAGC CCACGCTGCC GCTTATCTAT CTGATCGAAC GAGGCACGCC GGAACAGTCG GCGCTCGCGC GCGAGGCTAT CGAGCAAGGC GGCACCGATC GTTTCGACGA GATCTTTGAG GCGATCACGC GTTCCGGCGC GCTCGATCAC ACGCTTGAGT GCGCAAAACA GGAAGCACAG GCCGCGGCAA CAGCAATTTC TTCGTTTCCC AGTTCCATTT ACAAAGAAAG CCTGTTAAAC TTATGTTCTT ACTCGACGAC GAGGCAGTCT TAA
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Protein sequence | MSSTATPTPN AANLLAPIAE DMQQVNRVIR HRLASEVMLI NQISEYIISA GGKRLRPALL LLVAGALGDR TGYRHELAAV VEFIHTATLL HDDVVDESDL RRGRQTANAL FGNAASVLVG DFLYSRSFQM MVGVGKMRVM EILSEATNII SEGEVLQLLN MHDADVDEAR YMQVIRYKTA KLFEAAAQLG AVLSGADATT EAAAAEFGRR IGTAFQIMDD WLDYTGTPES MGKNAGDDLR EGKPTLPLIY LIERGTPEQS ALAREAIEQG GTDRFDEIFE AITRSGALDH TLECAKQEAQ AAATAISSFP SSIYKESLLN LCSYSTTRQS
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