Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2601 |
Symbol | |
ID | 6244084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2939870 |
End bp | 2940625 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642594390 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001858819 |
Protein GI | 186477349 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00264444 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAACTT TCCTTATGCC TCGCTTCTTC GTCGGTACCC CGTTTAAGAC CGACGACATT GTTTCCTTGC CGGATGAAGT CAACCGGCAC GTCCGCGTCC TGCGGCTGCA ACCGGGCGAC ACCGTCAGCC TGTTTAATGG CGACGGCGGC GAGTACGGCG CTGAAATCGT CGATATGGAT CGACATGGAA CGATCGTGCG CATCGTCGGA TTTCGCGACA TCGAATGCGA ACCGCCGTAC CGGCTGACGC TCGCCCAAGG TATCGCGGGT AGCGACAAGA TGGACTGGCT GATCGAAAAG GCTACCGAAC TGGGCGCGTG CGAATTCGTG CCGCTCACCA CGACTCGCAG CGTCGTGCGG CTCGCCGGCG AGCGCGCGCA ACGCCGCCAG GTTCATTGGC AGCGGATCGT GCAGGCGTCC TGCGAACAGT GCGGCCGCAA TCGCCTGCCC CAAGTCATGC CGACGCGCGA ACTGGCCACC TGGCTCAGCA CGATGCCGAA GGAGCCTGTC GACGGCGAAC TGCGCCTGCT GCTGTCGCCG CGTGCGAGCG TGCCGTTTTC CGCGCTGCCT GTCGAGCCGC CGAAGGTGCG TGCGCTGGTA CTGGTCGGCC CGGAAGGCGG CTTTTCGGCT GCTGAAGAAG CAGCAGCAGC GGCTCACGGC TTCACGGCTG TCGGCCTCGG CCCACGCGTG CTGCGTACCG AAACGGCCGG CATTGCGGTG CTGTCCGCAC TGGCTGCGCG CTGGGGCGGC TGGTAA
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Protein sequence | MRTFLMPRFF VGTPFKTDDI VSLPDEVNRH VRVLRLQPGD TVSLFNGDGG EYGAEIVDMD RHGTIVRIVG FRDIECEPPY RLTLAQGIAG SDKMDWLIEK ATELGACEFV PLTTTRSVVR LAGERAQRRQ VHWQRIVQAS CEQCGRNRLP QVMPTRELAT WLSTMPKEPV DGELRLLLSP RASVPFSALP VEPPKVRALV LVGPEGGFSA AEEAAAAAHG FTAVGLGPRV LRTETAGIAV LSALAARWGG W
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