Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2597 |
Symbol | |
ID | 6244080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2934810 |
End bp | 2935502 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642594386 |
Product | GntR domain-containing protein |
Protein accession | YP_001858815 |
Protein GI | 186477345 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000130942 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAACG TCCCGCATAC CGTCACTGAC GCTGCCATCG CGACGATCCG CGAGAGGATC GAAGGCGGCG CTTATCCTGT TGGGAGCCTG TTGCCGGCGC AGCGGCAGTT GTCGGAAGAA ATGGACATCA GCCGGGCGTC CCTGCGTGAG GCGCTATCGA CGCTCGAAGC GCTCGGCATG CTGACGATTC GCCCTGGGAA GGGCGTGTAT GTGCAATCGA CGAAGGCGTC GTCCGCCCAT CCGTGGCGGT TTGCGGATCA GTCGTCGTTG CCGGATACGT ATCAGATGCG GTTTGCGCTG GAGGGTTTTG TCGCGAGAAT GGCTGCGCTC GCTATTGGCG ACGACGATGT TGTATGGTTT GAAGACAATA TCGCTGCTTT GCAGGTCGCA TTGACCAATG GCGATCTCGA CGATGCCGCT CAGCTCGATT TCGACTTTCA TATGCGCATC GTGGCGATTG CTGGCAATGC TGCCATCGAG TCGATCTTGC GCAGCAGCGC TGACATTATG AAAGAGAGTC AGCGGATGCC GTTTTATCGA CGCGAGCTCG TGCTGTCCAC TTATCACGAG CATCGCGAGA TTCTTGACGC GCTGAAGGCG CGTAATCCTC ACGCTGCCGG GCTTGCTATC GAGAAGCACA TTGCTAATGC TGCCCAACGA GCCGGGGTTT ATTTTCCTAC GCCACAGGTG TGA
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Protein sequence | MKNVPHTVTD AAIATIRERI EGGAYPVGSL LPAQRQLSEE MDISRASLRE ALSTLEALGM LTIRPGKGVY VQSTKASSAH PWRFADQSSL PDTYQMRFAL EGFVARMAAL AIGDDDVVWF EDNIAALQVA LTNGDLDDAA QLDFDFHMRI VAIAGNAAIE SILRSSADIM KESQRMPFYR RELVLSTYHE HREILDALKA RNPHAAGLAI EKHIANAAQR AGVYFPTPQV
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