| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2570 |
|---|
| Symbol | |
|---|
| ID | 6244053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2890444 |
|---|
| End bp | 2891169 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642594359 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001858788 |
|---|
| Protein GI | 186477318 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0998599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.044732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCTA TCAAGAATGT GTCCAAGTGG TACGGTCAGT TCCAGGTGCT GACCGACTGC
ACGACGGAAA TCAAAAAGGG CGAAGTGGTC GTCGTGTGCG GCCCGTCGGG TTCGGGCAAG
TCGACGCTCA TCAAGACTGT GAACGGCCTG GAGCCGTTCC AGAAGGGCGA CATCGTGATC
AACGGCCAGT CGCTCAACGA CAAGAAGACG AATCTGTCGA AGCTGCGCTC GAAAGTCGGC
ATGGTGTTCC AGCACTTCGA ACTGTTCCCG CATCTGTCGA TCACCGAGAA CCTGACGCTC
GCACAGATCA AGGTGCTCGG CCGCTCGAAG GACGAAGCGA CCGCGAAGGG TCTGAAGCTG
CTCGATCGCG TCGGTTTGCG CGCGCATGCG GACAAGTATC CGGGGCAGTT GTCGGGCGGT
CAGCAGCAGC GTGTGGCGAT TGCGCGCGCG CTGTCGATGG ACCCTGTCGC GATGCTGTTC
GACGAACCGA CGTCGGCACT CGATCCGGAA ATGATCAACG AAGTGCTCGA TGTGATGGTG
GAACTCGCGC AGGAAGGCAT GACCATGATG TGCGTGACGC ACGAAATGGG CTTCGCGAAG
AAGGTCGCGC ATCGCGTGAT CTTCATGGAC AAGGGTCTTA TCGTCGAGGA CGACCGCAAG
GAAGATTTTT TTGCCAATCC GAAGTCGGAC CGTGCGAAAG ATTTCCTCGC AAAAATCCTG
CACTGA
|
|---|
| Protein sequence | MISIKNVSKW YGQFQVLTDC TTEIKKGEVV VVCGPSGSGK STLIKTVNGL EPFQKGDIVI
NGQSLNDKKT NLSKLRSKVG MVFQHFELFP HLSITENLTL AQIKVLGRSK DEATAKGLKL
LDRVGLRAHA DKYPGQLSGG QQQRVAIARA LSMDPVAMLF DEPTSALDPE MINEVLDVMV
ELAQEGMTMM CVTHEMGFAK KVAHRVIFMD KGLIVEDDRK EDFFANPKSD RAKDFLAKIL
H
|
|---|
| |