Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2553 |
Symbol | purH |
ID | 6244036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2874883 |
End bp | 2876448 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642594342 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_001858771 |
Protein GI | 186477301 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0961813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGC AAGCGCTCAT CTCCGTTTCC GACAAGTCCG GCATCGTCGA TTTCGCGAAA TCGCTGTCGG ACCTCGGCGT CAAGATCCTG TCGACGGGCG GCACCGCGAA ACTGCTCGCG GACGCCGGCC TTCCTGTTAC CGAAGTGGCC GACTACACGG GCTTTCCGGA AATGCTGGAT GGGCGCGTGA AGACGCTGCA CCCGAAGGTG CACGGCGGCA TCCTGGCTCG CCGCGATCTG CCCGAGCACA TGGCCGCGCT CGAAAAGCAC GACATTCCGA CCATCGACCT GCTCGTCGTG AACCTGTACC CGTTCGTGCA GACTGTGTCG AAGGAAGAAT GCACGCTCGA AGACGCGATC GAGAACATCG ATATCGGCGG CCCGACCATG CTGCGTTCGG CGGCGAAGAA TCATCGTGAC GTGACCGTCG TCGTCGACCC GGCCGACTAT GCGACCGTGC TCGACGAAAT GCGCGCAAAC GGCAACACGG TCGGCTACAA GACGAACTTC CGCCTCGCGA CCAAGGTGTT CGCGCACACC GCGCAGTACG ATGGCGCGAT TACGAACTAC CTGACGAGCC TCACGGAACA GCTGCAACAC CGTGACCGCA ACACGTACCC GGCCACGCTG AACATGGCGT TCGAGAAGGT GCAGGATCTG CGCTACGGTG AGAATCCGCA CCAAAGCGCT GCGTTCTATC GCGATATCGC GGCGCCTGCT GGCGCGCTGG CCAACTATCG CCAGCTGCAG GGCAAGGAAC TGTCGTACAA CAACATCGCC GACTCGGATG CCGCATGGGA ATGCGTGAAG ACGTTCGACG CGCCCGCCTG CGTGATCATC AAGCACGCGA ACCCGTGCGG CGTGGCCGTC GGCGCGAACC CGCACGAAGC GTATTCGAAG GCGTTCCAGA CCGATCCGAC CTCGGCGTTC GGCGGCATCA TCGCGTTCAA CCGCGAAGTC GACGAAACGG CCGCGCAGGC TGTCGCGAAG CAGTTCGTCG AAGTGCTGAT CGCGCCGTCG TTCAGCGAAG CGGCGAAGCA ACTGTTCGCC GCCAAGCAGA ACGTGCGTCT GCTCGAAATC GCGCTGGGTG AAGGCCATAA CGCATTCGAT CTGAAGCGCG TGGGCGGCGG TCTGCTGGTG CAATCGCTCG ATGCGAAGAA CGTGCAGCCG CACGAACTGC GCGTCGTCAC GAAACGTCAT CCGACGCCGA AGGAAATGGA CGACTTGCTG TTCGCATGGC GGGTGGCGAA GTTCGTGAAG TCGAACGCGA TCGTGTTCTG CGCGAACGGC ATGACGATGG GCGTCGGCGC CGGACAGATG AGCCGCGTGG ACTCGGCGCG CATCGCGAGC ATCAAGGCGC AGAACGCCGG CCTGACGCTC TCGGGTACGG CGGTGGCGTC GGATGCGTTC TTCCCGTTCC GCGACGGCCT CGACGTGGTC GTGAACGCGG GCGCAACCTG CGTCATCCAG CCGGGCGGCT CGATGCGCGA CGACGAAGTG ATCGCCGCCG CCGACGAGCA CAATATCGCA ATGGTCGTGA CGGGCATTCG CCACTTCCGC CACTGA
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Protein sequence | MIKQALISVS DKSGIVDFAK SLSDLGVKIL STGGTAKLLA DAGLPVTEVA DYTGFPEMLD GRVKTLHPKV HGGILARRDL PEHMAALEKH DIPTIDLLVV NLYPFVQTVS KEECTLEDAI ENIDIGGPTM LRSAAKNHRD VTVVVDPADY ATVLDEMRAN GNTVGYKTNF RLATKVFAHT AQYDGAITNY LTSLTEQLQH RDRNTYPATL NMAFEKVQDL RYGENPHQSA AFYRDIAAPA GALANYRQLQ GKELSYNNIA DSDAAWECVK TFDAPACVII KHANPCGVAV GANPHEAYSK AFQTDPTSAF GGIIAFNREV DETAAQAVAK QFVEVLIAPS FSEAAKQLFA AKQNVRLLEI ALGEGHNAFD LKRVGGGLLV QSLDAKNVQP HELRVVTKRH PTPKEMDDLL FAWRVAKFVK SNAIVFCANG MTMGVGAGQM SRVDSARIAS IKAQNAGLTL SGTAVASDAF FPFRDGLDVV VNAGATCVIQ PGGSMRDDEV IAAADEHNIA MVVTGIRHFR H
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