| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2528 |
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| Symbol | secF |
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| ID | 6244011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2849853 |
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| End bp | 2850803 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642594317 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001858746 |
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| Protein GI | 186477276 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC AGCGCGCGTT GGTCTTCAAC
GCGATCTCGC TGCTGACGTT CATCGCCGCC GTGTTTTTCC TGCTGCATCG CGGGCTGCAT
CTGTCCGTCG AATTCACGGG CGGCACCGTG ATCGAAGTGC AGTATCCGGG CGCCGTGCCG
CTCGAACCCG TGCGCGACAC GCTGACCAGG ATCGGCTACG GCGACGCTCA GGTGCAGAAC
TTCGGCACCT CGCGCGATGT GCTGATCCGT CTGCCGCTCA AGCAGGGCCT GACGTCGGCG
CAGCAGAGCG ACCAGGTGAT GGCCTCGCTG AAAGGCCAGG ACGCGAACGC GAAACTGCAA
CGCGTCGAGT TCGTCGGTCC GCAGGTCGGC AAGGAACTCG CCACCGACGG CCTGCTCGCG
CTCGCGTGCG TGGTCGCGGG CATCGTGATC TATCTGTCGT TCCGCTTCGA ATGGAAGTAC
GCGGTCGCGG GCGTGATCGC GAACCTGCAC GACGTGGTGA TCATTCTCGG CTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTATCGGTG CTGGCCGCGG TGCTTGCCGT GCTGGGCTAC
TCGGTGAACG AATCCGTCGT TATCTTCGAC CGGATTCGCG AAACCTTCCG CCGCGAACGC
AAGTTGAGCG TGATCGAAGT AATCAACCAC GCAATCACGA GCACGATGTC GCGTACTATC
ATCACCCACG GCTGTACGCA GATGATGGTG CTGTCGATGT TCCTGTTCGG CGGCCCGACG
CTGCACTACT TCGCACTCGC GCTGACGGTC GGTATTCTGT TCGGCATCTA TTCGTCGGTG
TTCGTCGCGG CGGCGCTGGC GATGTGGTTC GGCGTGAAGC GCGACGACCT GCTGAAGGAA
AAGAAGGAAC GCCACGATCC GAACGATCCC AACGCAGGCG CGCAGGTCTG A
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| Protein sequence | MEFFRIRKDI PFMQRALVFN AISLLTFIAA VFFLLHRGLH LSVEFTGGTV IEVQYPGAVP
LEPVRDTLTR IGYGDAQVQN FGTSRDVLIR LPLKQGLTSA QQSDQVMASL KGQDANAKLQ
RVEFVGPQVG KELATDGLLA LACVVAGIVI YLSFRFEWKY AVAGVIANLH DVVIILGFFA
FFQWEFSLSV LAAVLAVLGY SVNESVVIFD RIRETFRRER KLSVIEVINH AITSTMSRTI
ITHGCTQMMV LSMFLFGGPT LHYFALALTV GILFGIYSSV FVAAALAMWF GVKRDDLLKE
KKERHDPNDP NAGAQV
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