| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2513 |
|---|
| Symbol | |
|---|
| ID | 6243996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2830227 |
|---|
| End bp | 2831684 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642594302 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001858731 |
|---|
| Protein GI | 186477261 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTCA ACCATCAGAA CATTCGCCAC CAGGAGACGC AGGTGAACCA TCCCGTGCCG
CCCATCCCCG TGCGCCGCCC TTTTCCTGCT GAACTTCTTG CTGCGCTCAA GTCGGCATTC
GGCGACCGCG TATCCACATC CGAAGCCGTC CGCGCCCATC ATGGCCGCGA CGAGTCGCCC
TTCGATCCGC AGTTGCCTGA CGCGGTCGTC TATGCACGCA CCACCGAGGA CGTGCAGACC
ATCGTCAAGC TATGCGGTCG ATACGACGTG CCCATCATTC CGTACGGCAA CGGCTCCTCG
CTCGAAGGCC ACCTGCTTGC CGTGCAAGGC GGCGTGTCGA TCGATCTTTC CGAAATGAAC
CGCGTGCTGT CCATCAACGC GGAAGATCTG ACCGTCACCG TCGAGCCCGG GATCTCCCGC
AAGCAGCTGA ACGAAGCGCT GCGCGACACG GGCCTGTTCT TCCCGATCGA CCCCGGCGCG
GACGCGAGCA TAGGTGGCAT GTCGGCCACG CGCGCATCGG GCACGAACGC CGTGCGTTAC
GGCACGATGC GCGAAAACGT CCTCGGCCTG TCCGTGGTGC TGGCCGATGG CCGCGTGATC
CATACTGGCA CGCGCGCACG CAAGTCGTCG GCCGGCTACG ACCTCACGCG CCTCTTCGTC
GGTTCTGAAG GCACGCTCGG TGTCATCACC GAAATCACCG TGCGCCTGTA TCCGCAGCCG
GAAGCGGTGT CGGCAGCCGT GTGCACGTTC GCGTCGATGG GCGACGCCGT GCGCGCGGTG
ATCGAAACCA TCCAGATCGG CGTGCCCATC GCGCGCGTCG AGTTCGTCGA TTCGCTCGCC
GTCCGTTCGA TCAACCGTCA TTCGAACCTG ACCTTGCGCG AAGCGCCCAC GCTGTTCTTC
GAATTCCACG GCACGGAAGC CGGCGTGAAG GAACAGGCCG AACTCGTGCA GGAACTCGCT
GCGCAAAACA AGGGCGAAGG CTTCGAATGG GCGACGCGTC CGGAAGACCG CAGCCGTTTG
TGGAACGCGC GTCATAGCGC CTACTTCGCG ATGCTGCAGC TGAAGCCCGG CAGCCGCGCC
GTCACCACCG ACGTCTGCGT GCCCATCTCG CGGCTCGCGG AGTGCGTGGT CGAAACGGAA
GAAGACCTGA AGACTTCGCC GCTGCCCTGT CCGATCGTCG GACACGTAGG TGATGGAAAT
TTCCACGTCG CGATGCTGAT CGACCCGAAC AAGCCCGAAG AACTGGAGGA AGCGGAGCGC
CTGAATCATC GCATCGTGCA GCGCGCGCTG CGCATGGACG GCACCTGCAC GGGCGAGCAT
GGCGTAGGCC TGCACAAGAT GGGGTTCCTG CTCGAAGAAC ATGGTCCCGT CGCCGTCGAC
GTAATGCGCT CCATCAAGCA TTCGCTCGAT CCGCGCAACC TGATGAATCC AGGCAAGATC
TTTACGTGGG CAGCATAG
|
|---|
| Protein sequence | MGVNHQNIRH QETQVNHPVP PIPVRRPFPA ELLAALKSAF GDRVSTSEAV RAHHGRDESP
FDPQLPDAVV YARTTEDVQT IVKLCGRYDV PIIPYGNGSS LEGHLLAVQG GVSIDLSEMN
RVLSINAEDL TVTVEPGISR KQLNEALRDT GLFFPIDPGA DASIGGMSAT RASGTNAVRY
GTMRENVLGL SVVLADGRVI HTGTRARKSS AGYDLTRLFV GSEGTLGVIT EITVRLYPQP
EAVSAAVCTF ASMGDAVRAV IETIQIGVPI ARVEFVDSLA VRSINRHSNL TLREAPTLFF
EFHGTEAGVK EQAELVQELA AQNKGEGFEW ATRPEDRSRL WNARHSAYFA MLQLKPGSRA
VTTDVCVPIS RLAECVVETE EDLKTSPLPC PIVGHVGDGN FHVAMLIDPN KPEELEEAER
LNHRIVQRAL RMDGTCTGEH GVGLHKMGFL LEEHGPVAVD VMRSIKHSLD PRNLMNPGKI
FTWAA
|
|---|
| |