| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2483 |
|---|
| Symbol | |
|---|
| ID | 6243967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2792166 |
|---|
| End bp | 2792978 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642594273 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001858702 |
|---|
| Protein GI | 186477232 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.750322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATATCG AAGCCGTACG CGTCTTTCTG ATGACCCGGG GAATCGACTT CGGGACCAAG
GTACTCGGTG CAATCGTTCT GTGGCTCATC GGGCGATGGG CGATCGGCCT CATCATCGGC
CTGATGCGCA AAGTGCTCGC GCGCAACAGC AGGGTCGATC CGACACTCGC GCACTATCTC
GGCTCGATCC TCGCCGGCAT TCTGAACCTG CTGCTGGTGC TCGCGATCCT GCAGGTGTTC
GGCGTGCAGA CCACGTCGTT CGCCGCGCTG CTCGCGGGCG TCGGCCTCGC GGTCGGAACG
GCATGGGGCG GGCTGCTCGC GCACTTCGCG GCAGGCATCT TCATGCAGGT GCTGCGGCCG
TTCAAGGTCG GCGATTTCGT GACAGCGGGC GGCGTGACGG GCACGGTCCA GGAACTCGGT
CTGTTCGGCA CGACGATCGT CACGCCCGAC AATGTGTTGA CCATCGTCGG CAACAACACG
GTTTTCTCCG GGGTGATCTC GAATTACAGC GCGCAACCGG TGCGGCGCGT CGAACTGACG
GCGAAGGTTG CGAACGGCGT GGACCCGATC GATGCGGCAA ACCGGCTGCG CGCCGCCGTC
ACGAAGATTC CGAATGTTGC GGAGAATCCG CCGCCCGATA TCGAGGTGTT GTCGTTCACG
CCGGAAGGAC CGCTCCTGTG CGTTCGGCCT TACACGCATA ACGACAACTA CTGGCAGGTG
TACTTCGATA CGAACCGCGC GATCATCGAT ACCTTTCGCG AAGCGGGCTA TCCGACGCCG
GAAACCCCCG TCGTGCGGCG CGCGGCGACC TGA
|
|---|
| Protein sequence | MDIEAVRVFL MTRGIDFGTK VLGAIVLWLI GRWAIGLIIG LMRKVLARNS RVDPTLAHYL
GSILAGILNL LLVLAILQVF GVQTTSFAAL LAGVGLAVGT AWGGLLAHFA AGIFMQVLRP
FKVGDFVTAG GVTGTVQELG LFGTTIVTPD NVLTIVGNNT VFSGVISNYS AQPVRRVELT
AKVANGVDPI DAANRLRAAV TKIPNVAENP PPDIEVLSFT PEGPLLCVRP YTHNDNYWQV
YFDTNRAIID TFREAGYPTP ETPVVRRAAT
|
|---|
| |