Gene Bphy_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2480 
Symbol 
ID6243964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2788554 
End bp2789618 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID642594270 
ProductAraC family transcriptional regulator 
Protein accessionYP_001858699 
Protein GI186477229 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATATG AGCACGCGGT GAGTCGGTGG ATGGATTCAA CCTCGTCGAG CGCAGTCGTC 
AACCTCGGGC ACATGGTCAA ACGCATCGGT ATTCTCGTTT TTGAACGATT TCCGCTTAGC
GACGTTTGCC TGCTCGCTGA CGCATTCCGA CTCGCCAACG AAGCACAAGC CGACCAGGCC
GGCGGCGAGG GTTCGGGTGT CGAACCCTCC TACTCGATCG TCATGCTGTC CGAAATGGGC
GGCAGCGTCG TCAGCAGCTG TTCGCTGCGC GTGTGGACGG AGAGCCTCAA TGGACCGCTG
CTGAACGGCT TCGACACGCT GTTCATCGTC GGCGGTCCGG GTGCGTCGCG CGCCAAAGCG
AACGAGCGGC TGATCCGCCG GCTGCGCGCA ATCGCGCCGA AAATACGCGT CGTCAAGGCG
CTCGACGAAG GACTCGGCGT GCTGGCCGCC GCGGATATCG CCTTCGAACG GCGCGGCTGG
CGCAGCATGC CGGGCGCAAC CGACGCCGCG GGCAGGCCCG TCGCGCCCGT CGCCAACGAA
ACCCAATGGC AGATCGAGCC AGGCGCCTCC ATCGACGTCG ACGCGCCCGT GCGTTCGATC
GCGGCCGCGC TCACCGTGAT CAAGCGCGAT CACGGCACGC CGATCGCGCG GATCGTGTCG
GAGCGCGCAC TGTCGGGCGC GTCGCGCCGG CTCGACGCGA TCCTCGACGA CGACGAGAAA
AAGGGCATCA GCCGCAAGAT CACGACAGCC GCGCACTGGA TTCGCGAGAA CTACACGCGG
CATATCTCGG TGGCGGAAGC AGCCGCCGTC GCCAAGATGA GCGAGCGCAA CTTCCTGCGG
CGTTTCAAGG CGCAGGTCGG GCTCACGCCG TCGGAATATC TGCTGCGCGC GCGGCTCGAC
GCGAGCTGTC TGCTGCTGGC GGAAACCGAC ATGTCGATCG ACGGCATCGC GCGGCGTTGC
GGCGTGCGCA GCGGCGACGG ACTCGCGAAA ATCTTCCGCA AGCGCCTGTC CATTTCTCCT
ACCGACTATC GTGCGGCGCA TCGGCACAGC GTTACCAAGA ACTGA
 
Protein sequence
MRYEHAVSRW MDSTSSSAVV NLGHMVKRIG ILVFERFPLS DVCLLADAFR LANEAQADQA 
GGEGSGVEPS YSIVMLSEMG GSVVSSCSLR VWTESLNGPL LNGFDTLFIV GGPGASRAKA
NERLIRRLRA IAPKIRVVKA LDEGLGVLAA ADIAFERRGW RSMPGATDAA GRPVAPVANE
TQWQIEPGAS IDVDAPVRSI AAALTVIKRD HGTPIARIVS ERALSGASRR LDAILDDDEK
KGISRKITTA AHWIRENYTR HISVAEAAAV AKMSERNFLR RFKAQVGLTP SEYLLRARLD
ASCLLLAETD MSIDGIARRC GVRSGDGLAK IFRKRLSISP TDYRAAHRHS VTKN