Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2472 |
Symbol | |
ID | 6243956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2775691 |
End bp | 2777916 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642594262 |
Product | exopolysaccharide transport protein family |
Protein accession | YP_001858691 |
Protein GI | 186477221 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.342499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.203654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA ACTTTGACAA TCGCTATACG GACGTCAGTT CGGACGAGAT GCATCTGACG GATTATCTGC AGGCCATCGT CGCGAACTGG CGCTCGATTC TGCTGATTAC GCTGGCCGTC ACGGCACTGG GGACCGCCTA CGCCTTCCTT GCGACGCCCG TCTACCGTGC GGACGTTCTG TTCCATGTGG TCGACAAGTC CGAAAACAAC AACAAGCAGG ACGGCCTCCA GCCCCTCACG GGGATGTTCG ACACGAAGCC CTCCACGGCG GCCGAAATCG AGCTGATGAA GTCGCGGCTC GTGACGGAAG AGACCGTCAA GCAGCTGCAC CTCGATATCG CCGCGCGGCC GCATACGCTG CCTTTCGTCG GCGGGCTGCT GGCGCCGCTG ATGAGCGGCA AGTGGGGCAT CAAGCTGCCG CCGTCGCTGC AGCTGCCGAG CTACGCGTGG GGCAACGAGA GCATCAAGGT GTCGCGCTTC GACACCGCCA AGGACATGTA CGACAAGGAC TTCACGCTGA TTGCCGGCCA GAACGGCGAC TTCGTGCTGA ACAACCCGGA CGGGGTCGCG ATTCTCGAAG GCAAGGTCGG CGAAAACGTC GTGCGCGAAA CGCCGGCTGG CCCGATCGCG CTGCGTGTCG ACGAGATCGT CGGCGCGCCG GGCACGCGCT ACGAGCTGAC GCGTGCGTCA ACGCTGACGA CCGTCGAGCG TTTGCAAAAG GCGATGGATA TCGGCGAGTC GACGCTGCAG TCGGGTGTGA TCCGCGCGAG CCTCGAGGGC CAGAATCCGA AGCTCACGGC CGACATCATG AACAGCATGG CGCGCGAGTT CATCCGCCAG GATGTCGAAA GCCGTTCGTC GGAGGCCGAG CACATGCTGG CGTTCCTCGA CCAGCAGCTG CCGCAGCTGC GCAAGGAACT GGACGCCGCC GAGCAGCGCT ACAACACGTT CCGCAACCAG CACGGCACCG TCGATCTGAG CGAAGAAAGC CGGCTGCTGC TGCAGCAGAT CGTCGACAAC AAGACCAAGC TCGTCGACCT GCAGACGCAG CGCGCGGAGA TGTCACAGCG CTTCACCGCC AATCACCCCG CCGTGGCCGC GCTCGACGCG CAGATCGCTT CGCTGCAGGG CAATCTGTCG AAGATGGGCA AGAGTGTGCA GACGCTGCCC GACACCGAAC AGACGGCGCT GCGTCTGTTG CGCGACGTGC ACGTCGACAC CGAGCTCTAC ACGAACCTGC TCAACAGCGC GCAGCAGCTG CGCATCGCCA AGGCAGGCCA GGTGGGCGAC GTGCGGATCG TCGACTTCGC CGAAGCCGCC GACGACCCCG TGCGTCCGAA GCGCCTGATG GTGATCCTGA TCAGCTTCGG CTCGGGTCTG TTCATCGGCA TCGTGTTCGC CTTCGTGCGC AAGACGCTGT ACGGCGGTGT CGAACGTCCG GACGAGCTGG AATCCGCACT CGGCGTGCCC GTCTTCGCCG TGGTGCCGCG CAGCGAGCAG CAGATCCGCC TGCAGCAGGA CGTGATGATG CGCCGGCGCG GCCTGCACGT GCTCGCCGAA CAGGCGCCGC AGGACATCGC GGTGGAAGGC GTGCGCAACC TGCGCACCTC GCTGCAGCTG ACGGTCGACG ACAAGCAGAA CAACGTCGTG ATGCTGACGG GCTCGCGCCC GGATGCCGGC AAGTCGTTCC TGTCGGTGAA TCTGTCGGCG CTCGTCGCGT CGACGGCCAA GCGCACACTG GTGATCGACG GCGACATGCG GCGGGGCGAC GTGCACTCGC ACTTCGGCCT GCAGCACCAG CCGGGTCTTT CCGACGTGCT GCGCGGCGGC GATCTGCAGT CGTCGATCCA GCGCGAAGTG CTGCCCGGCC TCGACGTGCT GACCAAGGGC TCGCTGCCCT CGCATCCTTC CGAACTGCTG ATGAGCAAGC GCTTCGAAAC GATGCTCGAG GAACTCAAGA ACCAGTACGA CCTGATCATC ATCGATACGC CGCCCGTGCT CGCCGTCACC GATTCGACCG TGATCGGCAA GCACGTGGGG ACGACGTTGC TCGTGATTCG TCACGGCCGC CATCCGGTGA GCGAACTCGC GGAAACTGCG AAGCGCTTGC GTAACGGCGG CGTGAATTTG CAGGGGGTGT TGTTGACCGA CGTACCGCAG GCGGGCGCGT TCATCGGCTC GGGTTATCGA GGCGGCTACT ACGGCTACGA GAGTATCGCA GGCTGA
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Protein sequence | MAINFDNRYT DVSSDEMHLT DYLQAIVANW RSILLITLAV TALGTAYAFL ATPVYRADVL FHVVDKSENN NKQDGLQPLT GMFDTKPSTA AEIELMKSRL VTEETVKQLH LDIAARPHTL PFVGGLLAPL MSGKWGIKLP PSLQLPSYAW GNESIKVSRF DTAKDMYDKD FTLIAGQNGD FVLNNPDGVA ILEGKVGENV VRETPAGPIA LRVDEIVGAP GTRYELTRAS TLTTVERLQK AMDIGESTLQ SGVIRASLEG QNPKLTADIM NSMAREFIRQ DVESRSSEAE HMLAFLDQQL PQLRKELDAA EQRYNTFRNQ HGTVDLSEES RLLLQQIVDN KTKLVDLQTQ RAEMSQRFTA NHPAVAALDA QIASLQGNLS KMGKSVQTLP DTEQTALRLL RDVHVDTELY TNLLNSAQQL RIAKAGQVGD VRIVDFAEAA DDPVRPKRLM VILISFGSGL FIGIVFAFVR KTLYGGVERP DELESALGVP VFAVVPRSEQ QIRLQQDVMM RRRGLHVLAE QAPQDIAVEG VRNLRTSLQL TVDDKQNNVV MLTGSRPDAG KSFLSVNLSA LVASTAKRTL VIDGDMRRGD VHSHFGLQHQ PGLSDVLRGG DLQSSIQREV LPGLDVLTKG SLPSHPSELL MSKRFETMLE ELKNQYDLII IDTPPVLAVT DSTVIGKHVG TTLLVIRHGR HPVSELAETA KRLRNGGVNL QGVLLTDVPQ AGAFIGSGYR GGYYGYESIA G
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