Gene Bphy_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2472 
Symbol 
ID6243956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2775691 
End bp2777916 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content65% 
IMG OID642594262 
Productexopolysaccharide transport protein family 
Protein accessionYP_001858691 
Protein GI186477221 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.342499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.203654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCA ACTTTGACAA TCGCTATACG GACGTCAGTT CGGACGAGAT GCATCTGACG 
GATTATCTGC AGGCCATCGT CGCGAACTGG CGCTCGATTC TGCTGATTAC GCTGGCCGTC
ACGGCACTGG GGACCGCCTA CGCCTTCCTT GCGACGCCCG TCTACCGTGC GGACGTTCTG
TTCCATGTGG TCGACAAGTC CGAAAACAAC AACAAGCAGG ACGGCCTCCA GCCCCTCACG
GGGATGTTCG ACACGAAGCC CTCCACGGCG GCCGAAATCG AGCTGATGAA GTCGCGGCTC
GTGACGGAAG AGACCGTCAA GCAGCTGCAC CTCGATATCG CCGCGCGGCC GCATACGCTG
CCTTTCGTCG GCGGGCTGCT GGCGCCGCTG ATGAGCGGCA AGTGGGGCAT CAAGCTGCCG
CCGTCGCTGC AGCTGCCGAG CTACGCGTGG GGCAACGAGA GCATCAAGGT GTCGCGCTTC
GACACCGCCA AGGACATGTA CGACAAGGAC TTCACGCTGA TTGCCGGCCA GAACGGCGAC
TTCGTGCTGA ACAACCCGGA CGGGGTCGCG ATTCTCGAAG GCAAGGTCGG CGAAAACGTC
GTGCGCGAAA CGCCGGCTGG CCCGATCGCG CTGCGTGTCG ACGAGATCGT CGGCGCGCCG
GGCACGCGCT ACGAGCTGAC GCGTGCGTCA ACGCTGACGA CCGTCGAGCG TTTGCAAAAG
GCGATGGATA TCGGCGAGTC GACGCTGCAG TCGGGTGTGA TCCGCGCGAG CCTCGAGGGC
CAGAATCCGA AGCTCACGGC CGACATCATG AACAGCATGG CGCGCGAGTT CATCCGCCAG
GATGTCGAAA GCCGTTCGTC GGAGGCCGAG CACATGCTGG CGTTCCTCGA CCAGCAGCTG
CCGCAGCTGC GCAAGGAACT GGACGCCGCC GAGCAGCGCT ACAACACGTT CCGCAACCAG
CACGGCACCG TCGATCTGAG CGAAGAAAGC CGGCTGCTGC TGCAGCAGAT CGTCGACAAC
AAGACCAAGC TCGTCGACCT GCAGACGCAG CGCGCGGAGA TGTCACAGCG CTTCACCGCC
AATCACCCCG CCGTGGCCGC GCTCGACGCG CAGATCGCTT CGCTGCAGGG CAATCTGTCG
AAGATGGGCA AGAGTGTGCA GACGCTGCCC GACACCGAAC AGACGGCGCT GCGTCTGTTG
CGCGACGTGC ACGTCGACAC CGAGCTCTAC ACGAACCTGC TCAACAGCGC GCAGCAGCTG
CGCATCGCCA AGGCAGGCCA GGTGGGCGAC GTGCGGATCG TCGACTTCGC CGAAGCCGCC
GACGACCCCG TGCGTCCGAA GCGCCTGATG GTGATCCTGA TCAGCTTCGG CTCGGGTCTG
TTCATCGGCA TCGTGTTCGC CTTCGTGCGC AAGACGCTGT ACGGCGGTGT CGAACGTCCG
GACGAGCTGG AATCCGCACT CGGCGTGCCC GTCTTCGCCG TGGTGCCGCG CAGCGAGCAG
CAGATCCGCC TGCAGCAGGA CGTGATGATG CGCCGGCGCG GCCTGCACGT GCTCGCCGAA
CAGGCGCCGC AGGACATCGC GGTGGAAGGC GTGCGCAACC TGCGCACCTC GCTGCAGCTG
ACGGTCGACG ACAAGCAGAA CAACGTCGTG ATGCTGACGG GCTCGCGCCC GGATGCCGGC
AAGTCGTTCC TGTCGGTGAA TCTGTCGGCG CTCGTCGCGT CGACGGCCAA GCGCACACTG
GTGATCGACG GCGACATGCG GCGGGGCGAC GTGCACTCGC ACTTCGGCCT GCAGCACCAG
CCGGGTCTTT CCGACGTGCT GCGCGGCGGC GATCTGCAGT CGTCGATCCA GCGCGAAGTG
CTGCCCGGCC TCGACGTGCT GACCAAGGGC TCGCTGCCCT CGCATCCTTC CGAACTGCTG
ATGAGCAAGC GCTTCGAAAC GATGCTCGAG GAACTCAAGA ACCAGTACGA CCTGATCATC
ATCGATACGC CGCCCGTGCT CGCCGTCACC GATTCGACCG TGATCGGCAA GCACGTGGGG
ACGACGTTGC TCGTGATTCG TCACGGCCGC CATCCGGTGA GCGAACTCGC GGAAACTGCG
AAGCGCTTGC GTAACGGCGG CGTGAATTTG CAGGGGGTGT TGTTGACCGA CGTACCGCAG
GCGGGCGCGT TCATCGGCTC GGGTTATCGA GGCGGCTACT ACGGCTACGA GAGTATCGCA
GGCTGA
 
Protein sequence
MAINFDNRYT DVSSDEMHLT DYLQAIVANW RSILLITLAV TALGTAYAFL ATPVYRADVL 
FHVVDKSENN NKQDGLQPLT GMFDTKPSTA AEIELMKSRL VTEETVKQLH LDIAARPHTL
PFVGGLLAPL MSGKWGIKLP PSLQLPSYAW GNESIKVSRF DTAKDMYDKD FTLIAGQNGD
FVLNNPDGVA ILEGKVGENV VRETPAGPIA LRVDEIVGAP GTRYELTRAS TLTTVERLQK
AMDIGESTLQ SGVIRASLEG QNPKLTADIM NSMAREFIRQ DVESRSSEAE HMLAFLDQQL
PQLRKELDAA EQRYNTFRNQ HGTVDLSEES RLLLQQIVDN KTKLVDLQTQ RAEMSQRFTA
NHPAVAALDA QIASLQGNLS KMGKSVQTLP DTEQTALRLL RDVHVDTELY TNLLNSAQQL
RIAKAGQVGD VRIVDFAEAA DDPVRPKRLM VILISFGSGL FIGIVFAFVR KTLYGGVERP
DELESALGVP VFAVVPRSEQ QIRLQQDVMM RRRGLHVLAE QAPQDIAVEG VRNLRTSLQL
TVDDKQNNVV MLTGSRPDAG KSFLSVNLSA LVASTAKRTL VIDGDMRRGD VHSHFGLQHQ
PGLSDVLRGG DLQSSIQREV LPGLDVLTKG SLPSHPSELL MSKRFETMLE ELKNQYDLII
IDTPPVLAVT DSTVIGKHVG TTLLVIRHGR HPVSELAETA KRLRNGGVNL QGVLLTDVPQ
AGAFIGSGYR GGYYGYESIA G