| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2470 |
|---|
| Symbol | |
|---|
| ID | 6243954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2773448 |
|---|
| End bp | 2774443 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642594260 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001858689 |
|---|
| Protein GI | 186477219 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.482517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA ATGCACGCAT TTTCGTCGCG GGACATCGCG GGATGGTCGG CTCGGCGCTC
GTGCGCAAGC TCGACGCGAG CGGCTATCGC AACCTCGTCA CGCGCACGCA TGCCGAACTC
GATCTGACCG ATCAGGCCGC CGTGAACCGC TTCTTCGAGT GCGAGCAGAT CGACGTCGTG
CTGCTCGCGG CGGCGCGCGT CGGCGGTATT CTCGCCAACG CGACGCAGCC CGGCGAGTTT
CTCTATGAGA ACCTCGTGAT CGAAACCAAC GTGATTCACG CGGCGTATCG CGCGAACGTC
GACCGGCTGG TGTTCTTCGG TTCGTCGTGC ATCTACCCGA AGCTGTGTCC GCAGCCGATC
CTCGAATCGT ATCTGCTGAC GTCGGAACTG GAACCGACCA ACGACGCGTA CGCGATCGCG
AAGATTGCCG GCCTGAAACT GTGCGACGCC TACAACCGCG AGTACGGCAC GCGCTATGTC
GCGCTCATGC CGACCAACCT GTACGGTCCG AACGACAACT ACGACCTCAA GAACAGTCAT
GTGCTGCCGG CGCTGATCCG CAAGGCGCAC GAGGCGCGCC TGCACGGCGA CCGGTCTTTG
ATCGTGTGGG GCAGCGGCAC GCCGCGCCGC GAGTTCCTGC ATGTCGACGA TCTCGCGGCG
GCGACGCTGT TCGTACTCGA GCACGACGTG AATACGGGTG TGTTCAACGT CGGCGTCGGC
GAAGACCTCA GCATTCGCGA ACTCGCGCAG ACGGTCTGCG ATGTGGTGGG CTTCGAAGGC
GATCTGCAGT TCGATGCGAG CAAGCCCGAC GGCACGCCGC GCAAGCTGCT CGATGTGTCG
CGGCTGGCGG CGATGGGCTG GCGCGCGAGC ATCGGGCTCG CGGAAGGCAT CGGCAACACC
TATCGCGAGT TTGCCGCCCG GTATGACGAG AAGTACGGGG ACAAGCATGG GGAGACACGC
GCCGCGCCTT CGTTCGCGAT GGCTGCGCGT GTCTGA
|
|---|
| Protein sequence | MNKNARIFVA GHRGMVGSAL VRKLDASGYR NLVTRTHAEL DLTDQAAVNR FFECEQIDVV
LLAAARVGGI LANATQPGEF LYENLVIETN VIHAAYRANV DRLVFFGSSC IYPKLCPQPI
LESYLLTSEL EPTNDAYAIA KIAGLKLCDA YNREYGTRYV ALMPTNLYGP NDNYDLKNSH
VLPALIRKAH EARLHGDRSL IVWGSGTPRR EFLHVDDLAA ATLFVLEHDV NTGVFNVGVG
EDLSIRELAQ TVCDVVGFEG DLQFDASKPD GTPRKLLDVS RLAAMGWRAS IGLAEGIGNT
YREFAARYDE KYGDKHGETR AAPSFAMAAR V
|
|---|
| |