| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2455 |
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| Symbol | tolB |
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| ID | 6243939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2753859 |
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| End bp | 2755151 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594244 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001858674 |
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| Protein GI | 186477204 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.328002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.860267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGA TGACGAAGCT AGGCCTGCGA GCACTCGTAG CGTCGTGTCT GATCGCCGCG
GGCGGTGCCG CCCATGCACA ACTCAACGTC CTCGTGACGG GCGTCGGATC CACGCAGTTC
CCGATTGCTA CGGCAAATTT TGCCAACGAG GCAAATTCTC CCCAGCAGAT CAGCACCATC
GTCCGCCAGG ACCTTCAGCG CAGCGGTAAA TTCACCAACA TCGACGCGGG CAGCGCGCCC
GTATCGGAAG GCGATTCGGT CGATCTCGGC GCATGGAAGG CAAAGGGCGC GAACGCGTTC
GTCGCGGGCA GCGTCACGAA GCTGCCGAAC GGCCAGTACC AGGTTCGCTT CAAGCTGTAC
GACACCGTCA ACCAGCAAAG CCTCGGCGGC CTCGAACTGG TCAGCCCGGA AGGCGGCCTG
CGCATGAGCG CGCACAAGGT GGCCGACTAC ATCTACGCGA AGCTGATGGG CGGCCGCGGC
GTGTTCGCGA CGCGTCTGTC GTACGTGATC AAGACGGGCA ACCGCTATCA GCTGCAGATT
TCCGATTCCG ACGGCCAGGA CGCGCACATC GCACTGTCCA GCCCGGAGCC CATCATCTCG
CCGGCGTGGT CGCCGGACGG CACGAAGGTC GCGTACGTCT CGTTCGAAAA GAAAAAGCCG
ATCGTCTATA TCCACGATCT GCCGACGGGC CGCCGCGTCG TCGTGTCGGA CCAGAAGGGC
AACAACAGTG CGCCCGCGTG GTCGCCTGAC GGCCGCACGC TCGCCGTCGC ACTGTCGCGC
ACGGGCAACA CGCAGATTTT CGCCGTCAAC GCCGACGGCA GCGGCCTACG CCGCCTGACG
CAAGGCAGCT CTATCGACAC CGAGCCGTCG TACTCGCCCG ATGGCCAGTC GATCTACTTC
ACGAGCGACC GCGGCGGCCA GCCGCAGATC TACAAGATGC CCGCCAGCGG CGAGGCATCG
GGCGGCGCAC AGCGCGTGAC GTTCACGGGC AACTACAATA CGAGTCCGCG CGTGAGCCCG
GACGGCAAGC AGCTCGCCTA TATCTCGCGC ACGGGCGGGG GCTTCAAGCT GTATATCCAG
GATCTGCAGT CGGGCGTCGC GACGGCGCTC ACCGATACAA CACATGACGA ATCGCCGAGC
TTTGCGGCGA ATGGTCAGTA CATTCTTTAC GCCACTCAGG TGAACGGCCG TGGCGTGTTG
GCCGCAGTAT CGACCGACGG TCGGACGCGG CAGGTCCTGT CCGTTCAGGG GGGCAGCGTA
CGCGAGCCGT CCTGGGGCCC GTTTATGCAA TAA
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| Protein sequence | MSLMTKLGLR ALVASCLIAA GGAAHAQLNV LVTGVGSTQF PIATANFANE ANSPQQISTI
VRQDLQRSGK FTNIDAGSAP VSEGDSVDLG AWKAKGANAF VAGSVTKLPN GQYQVRFKLY
DTVNQQSLGG LELVSPEGGL RMSAHKVADY IYAKLMGGRG VFATRLSYVI KTGNRYQLQI
SDSDGQDAHI ALSSPEPIIS PAWSPDGTKV AYVSFEKKKP IVYIHDLPTG RRVVVSDQKG
NNSAPAWSPD GRTLAVALSR TGNTQIFAVN ADGSGLRRLT QGSSIDTEPS YSPDGQSIYF
TSDRGGQPQI YKMPASGEAS GGAQRVTFTG NYNTSPRVSP DGKQLAYISR TGGGFKLYIQ
DLQSGVATAL TDTTHDESPS FAANGQYILY ATQVNGRGVL AAVSTDGRTR QVLSVQGGSV
REPSWGPFMQ
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