| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2448 |
|---|
| Symbol | nrdR |
|---|
| ID | 6243932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2747791 |
|---|
| End bp | 2748285 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642594237 |
|---|
| Product | transcriptional regulator NrdR |
|---|
| Protein accession | YP_001858667 |
|---|
| Protein GI | 186477197 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
|---|
| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTGCC CCTTCTGCCG GCACGACGAC ACGCAGGTCG TCGACTCGCG GGTGTCCGAA
GACGGCGCCG CGATCCGGCG CCGCCGGCGT TGCCCGGCCT GCGACAAGCG TTTTACGACG
TACGAGCGGG TCGAGCTGGC GTTGCCTTCG GTCGTCAAGA AGGACGGCAG CCGCACGGAA
TTCGATCGCC GCAAGATCGT TGCGAGCATG CAACTGGCAC TGCGCAAGCG TCCAGTTGCG
GCCGACGCCA TCGACGCTGC CGCGTCGCGC ATCGAGTATC AGCTGCTTGG CAGCGGCGAG
CGCGAAGTGC GCAGTGAGCG CCTCGGCGAA CTGGTGATGA ACGAACTGCG CGCGCTCGAC
ACAATCGCGT ATGTGCGCTT TGCGTCCGTG TACCGGCGTT TCGAAGACGT CTCCGAATTC
GAGGACGTGA TTGAGGAATT TCGCCGGACG AACGCACCGC CGGCCGCGCC CGCGAAGCCG
ACCCGCAAGC GCTGA
|
|---|
| Protein sequence | MRCPFCRHDD TQVVDSRVSE DGAAIRRRRR CPACDKRFTT YERVELALPS VVKKDGSRTE
FDRRKIVASM QLALRKRPVA ADAIDAAASR IEYQLLGSGE REVRSERLGE LVMNELRALD
TIAYVRFASV YRRFEDVSEF EDVIEEFRRT NAPPAAPAKP TRKR
|
|---|
| |