| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2447 |
|---|
| Symbol | |
|---|
| ID | 6243931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2747058 |
|---|
| End bp | 2747618 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642594236 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001858666 |
|---|
| Protein GI | 186477196 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4970] Tfp pilus assembly protein FimT |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.631468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG ATGCTGCTAC GCGGCGCGCG CGCCGTGGGT TCACACTGTT CGAAACGCTC
GTGGTGATCG CATTGCTGGC GATCCTCGCA ACATTGACGG TGCCGTCGTT CCTGGCGTGG
CATGTGCGAG ATCAGGTCGA CGCACGCGCA CGCGCGCTGC TGGCCACGCT CAGCTACGCG
CGCGGCGAGG CGTTGCGCCG GGGCGCACGC GTGACCGTGT GCCGCGTCGA CGCGGCGCGT
CACTGTCTTG CTACGGCGCA ACCGTGCAAG GCGGGTGTCC TCGACTGGTC ATGCGGGTGG
GCCGTCATGA TAGAGCGCGC GAGCGGCTTC TATCCGTTGC GCGTGCAGCC CGATCTCTCG
TCCGTCAGCA TCGCAGGTGC GCTTACCAAT CTGACGTTCA CACCGCCCGC GGGCCAGGTG
AATGGCAGCT TCCGCAGCTT TGATATCGGA CCGCGCGCCG ATTCGAAGGC GACGCAAGGG
ACGGAGTGGC GGCGTTGCAT TCGCATCGCG GCGGGCGGAC GTGCGCGCAT CGTTGACGGC
GCGTGTGGAG CGGCGACATG A
|
|---|
| Protein sequence | MKRDAATRRA RRGFTLFETL VVIALLAILA TLTVPSFLAW HVRDQVDARA RALLATLSYA
RGEALRRGAR VTVCRVDAAR HCLATAQPCK AGVLDWSCGW AVMIERASGF YPLRVQPDLS
SVSIAGALTN LTFTPPAGQV NGSFRSFDIG PRADSKATQG TEWRRCIRIA AGGRARIVDG
ACGAAT
|
|---|
| |