| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2443 |
|---|
| Symbol | |
|---|
| ID | 6243927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2744824 |
|---|
| End bp | 2745243 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642594232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001858662 |
|---|
| Protein GI | 186477192 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4968] Tfp pilus assembly protein PilE |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.103414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA ACACGCACGC ATTCTCCCTG CTGGAACTGG TTGTCGCACT GGCGATCGCA
GCGACGCTCG CTGCTTTCGC AATACCGTCG TATCGCGACC ATATCGCGAA GGCTCACCGA
ACCGATGCGG CGTCCGCGCT GTTTCGCGCG GCGCAGTTCG CCGAGTCCGC CGTGCGTGCA
GACGGTGCAC CGTTGCCGGC CGGTCTGGAT CAGGCGCCGC AAGGGGGCAA GGCGATCTAC
CGGCTGCGCA TCCTGCCCGC CGACGACACG AACGGTGGCT ACGCGCTCGA AGCGCAGCCG
CTCGAAACCG GTCCGATGGC CGGCGACGCG TGCGGCACGT TCATACTTGA TGCAACAGGG
CTAAGAAACA ATCGGGGTGC AGCGGGCGCC AACCCCGACG ATTGCTGGAG TGCGCGCTAG
|
|---|
| Protein sequence | MKPNTHAFSL LELVVALAIA ATLAAFAIPS YRDHIAKAHR TDAASALFRA AQFAESAVRA
DGAPLPAGLD QAPQGGKAIY RLRILPADDT NGGYALEAQP LETGPMAGDA CGTFILDATG
LRNNRGAAGA NPDDCWSAR
|
|---|
| |