| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2435 |
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| Symbol | |
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| ID | 6243919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2737825 |
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| End bp | 2739147 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594224 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_001858654 |
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| Protein GI | 186477184 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.125362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATCGA GCACACGACG CGAAATCCAG CCGGGCTACC AGTCGGGCTT CGCCAATGAA
TTCGCCACCG AGGCTTTGCC CGGCGCGCTG CCGCAAGGCC GCAACTCGCC GCAGCGCGCA
CCGTACGGCC TGTACGCGGA GCAGTTGTCG GGCACGGCAT TCACCGCGCC GCGCGGCCAT
AACCGCCGTT CGTGGCTGTA CCGCATCCGC CCGGCGGCCG TGCATCAGCC GTTCACGGCG
CTGCCGTCGC ACCGGCTCGT CGCGAATTTC GCCGAGGTGC CGCCGACGCC GCCCAATCAG
CTGCGCTGGG ATCCGCTGCC GATGCCGACA GAGCCGACCG ATTTCGTCGA CGGCTGGGTG
ACGATGGCGG GCAACGGCTC GGCGGAAGCG ATGAGTGGCT GCGCGATTCA CGTATACGCG
GCCAATCAGT CGATGCAGGA CCGCTTCTTC TACAACGCCG ACGGCGAGTT GCTGATCGTG
CCGCAGGCGG GGCGTCTTTC GATCTTCACG GAAATGGGCA AGCTCGATGT CGAGCCGTTC
GAGATCGCGG TGATACCGCG CGGCGTACGC TTTTCGGTAT CGCTGCTGGA TGGCCGCGCG
AGCGGCTACA TCTGCGAAAA CTTCGGCGCA TTGCTGCGCC TGCCGGACCT CGGGCCGATC
GGCTCAAACG GACTGGCGAA TCCGCGCGAC TTCCTGACGC CGCATGCGGC TTATGAAGAC
CGCGAGGGCG ACTTCGAACT GGTCGCGAAG ATGAACGGCC ATCTGTGGCG CGCGGATATC
GGCCACTCGC CGCTCGACGT GGTTGCGTGG CACGGCAACT ACGCGCCGTA CAAGTACGAT
CTGCGCCACT TCAATACGAT CGGCTCGATC AGCTATGACC ATCCGGACCC GTCGATCTTC
CTCGTGCTGC AATCGCAAAG CGACACGCCA GGCGTCGATT CGATCGACTT CGTGATCTTC
CCGCCGCGCT GGCTCGCTGC CGAAGACACG TTCCGTCCGC CCTGGTTCCA CCGCAATGTC
GCGAGCGAGT TCATGGGGCT TGTGCACGGC GCGTACGACG CGAAGGCAGA AGGCTTCGTG
CCCGGCGGCG CGAGCCTGCA CAACTGCATG TCGGGCCACG GCCCGGACGC GGACACGTTC
GAGAAGGCGT CGAACATCGA CACGAGCAAG CCGAACAAGG TCGACAACAC GATGGCCTTC
ATGTTCGAAA CGCGCACGCT CATCAAGCCG ACCCGCTTCG CATTGGAAAC GGCGCAGCTT
CAGGCGCATT ACTTCGAATG CTGGCAAGGT CTCGAGAAAC ATTTCAACCC GGAGCAACGA
TGA
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| Protein sequence | MESSTRREIQ PGYQSGFANE FATEALPGAL PQGRNSPQRA PYGLYAEQLS GTAFTAPRGH
NRRSWLYRIR PAAVHQPFTA LPSHRLVANF AEVPPTPPNQ LRWDPLPMPT EPTDFVDGWV
TMAGNGSAEA MSGCAIHVYA ANQSMQDRFF YNADGELLIV PQAGRLSIFT EMGKLDVEPF
EIAVIPRGVR FSVSLLDGRA SGYICENFGA LLRLPDLGPI GSNGLANPRD FLTPHAAYED
REGDFELVAK MNGHLWRADI GHSPLDVVAW HGNYAPYKYD LRHFNTIGSI SYDHPDPSIF
LVLQSQSDTP GVDSIDFVIF PPRWLAAEDT FRPPWFHRNV ASEFMGLVHG AYDAKAEGFV
PGGASLHNCM SGHGPDADTF EKASNIDTSK PNKVDNTMAF MFETRTLIKP TRFALETAQL
QAHYFECWQG LEKHFNPEQR
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