| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2410 |
|---|
| Symbol | |
|---|
| ID | 6243896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2709093 |
|---|
| End bp | 2710244 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594201 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001858631 |
|---|
| Protein GI | 186477161 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA AAAGACCGAT GGCAAAGCGG ATGATCATCA TGCTGATCTG CGTGGGCGTG
CTGCTCGGCG CACTGGTCGG CTTCAATCTG TTCAAGGCGC ACATGATCCG CAAGTTCATG
GCGAACAACG CGGTGCCTTC CGCGACCGTC ACGTCCGCCG TCGCGCGCTA TCAGGCGTGG
CAGCCGCAAC TGACTGCCGT GGGCAGCCTG CGCGCCGTGC GCGGCGTCGA CGTGACGACG
GAAGTGCCCG GGCTCGTGCG TGAGATCGCG TTCAACTCGG GACAGGAAGT GAAGGCGGGT
CAGGTGCTCG TGCGCCTGAA CGACGACTCG GACCGCGCGC AACTTGCGTC GCTGCAAGCC
GCCGCGGACC TCGCACAAAC AGTCTACAAG CGCGACAAGG CGCAGTTCGA CATCCAGGCC
ATCGCGAAGG CGCAACTCGA TGCCGATGCC GCCGACCTCA AGAGCAAGCG TGCGCAGGTC
GATCAGCAGG CCGCGCTCGT CGACAAGAAA ACGATCCGCG CGCCGTTCGC AGGGCGCGTC
GGCATCACGA CGGTCAACCC GGGCCAGTAT ATGAATCCCG GCGATGCGAT CGTCACGTTA
CAGGCCGTCG ATCCCATCTA CGCCGACTTC TATCTGCCGC AACAGCAGCT CGGCCAACTG
CAGGTTGGAC AGACGGTTGT CGTCGATACG AATGCGTACA GCAGCCGCAC GTTCGACGGC
AAGATACGCT CGATCAATCC GCGCGTCGAC AACACGACGC GCAACGTGCA AATCGAAGCC
ACCGTCGACA ACCGCGAACG CAAGCTGCTG CCCGGCATGT ATGCGAACGT GAAGATCGAC
GCGGGCGGTG AACAGCGCTA CCTGACGCTG CCGCAAACAG CCATCACGTA TAACCCGTAC
GGTGCGACCG TGTTCGTCGT CAAACCCGGC GAACATAAGG ACGCGCAGGG CAAGGCGATG
CCCGTCGCGC AGCAGGTGTT CGTCACGCCT GGACCGACGC GCGGCGATCA GGTCGCGATA
CTGAAGGGCA TCGCGGAAGG CACGCAGGTC GTGACGAGCG GTCAGCTGAA ACTGAAGAAC
GGCACACCCC TCGTGATCGA CAATCGCGTG CAGCCCGCTG ACAGTCCCGA TCCGACGCCA
CAGGAACAAT AA
|
|---|
| Protein sequence | MTTKRPMAKR MIIMLICVGV LLGALVGFNL FKAHMIRKFM ANNAVPSATV TSAVARYQAW
QPQLTAVGSL RAVRGVDVTT EVPGLVREIA FNSGQEVKAG QVLVRLNDDS DRAQLASLQA
AADLAQTVYK RDKAQFDIQA IAKAQLDADA ADLKSKRAQV DQQAALVDKK TIRAPFAGRV
GITTVNPGQY MNPGDAIVTL QAVDPIYADF YLPQQQLGQL QVGQTVVVDT NAYSSRTFDG
KIRSINPRVD NTTRNVQIEA TVDNRERKLL PGMYANVKID AGGEQRYLTL PQTAITYNPY
GATVFVVKPG EHKDAQGKAM PVAQQVFVTP GPTRGDQVAI LKGIAEGTQV VTSGQLKLKN
GTPLVIDNRV QPADSPDPTP QEQ
|
|---|
| |