| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2368 |
|---|
| Symbol | |
|---|
| ID | 6243854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2660468 |
|---|
| End bp | 2661124 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642594159 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001858589 |
|---|
| Protein GI | 186477119 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
[TIGR03003] ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTGC AGAACGCAAT CGACTTTCTG CCGATCCTGC TGAAGGGCGC TGTCATCACC
ATCGAGATCA CAGCCTGTGC ATTTGTGCTC AGCTCCATTC TCGGTCTCGT GCTGGCGCTG
TTGAAGGTGT CGCGCAACCG CGCGGCATCG ACGTTCGGCA GCACCGTGAT CAATCTGATT
CGCGGGCTGC CGATCATCGT CCAGCTGTTT TATATCTACT TCGTGCTGCC CGACCTGGGC
GTGCAACTGT CGGCGTTCCA GGCTGGCGTG ATCGGTCTCG GTATCGCGTA CTCGGCGTAT
CAGGCTGAGA ACTTCCGCGC GGGCATCGAG GCGATCGATC ACGGGCAGAT CGAAGCCGCG
CACGCGATCG GCATGCGCGG CCCGCTGATC ATGCGGCGCG TGGTGTTGCC GCAGGCCTTC
AGGATCGCGC TGCCGCCTTA CGGCAATACG CTGGTGATGC TGCTGAAAGA TTCCTCGGTG
GCATCGACGA TCACCGTCGC TGAAATTACG CGCGCCGGGC AACTGATTGC ATCGTCGACG
TTCCAGAACA TGACGGTCTA CACGCTCGTC GCGCTGCTCT ACCTGGTGCT GAGCCTGCCG
CTGATGTTCG GCGTCAACCA GATCGGCAAG CGGCTCGCCT TGAGGAAAAG CCGATGA
|
|---|
| Protein sequence | MFLQNAIDFL PILLKGAVIT IEITACAFVL SSILGLVLAL LKVSRNRAAS TFGSTVINLI
RGLPIIVQLF YIYFVLPDLG VQLSAFQAGV IGLGIAYSAY QAENFRAGIE AIDHGQIEAA
HAIGMRGPLI MRRVVLPQAF RIALPPYGNT LVMLLKDSSV ASTITVAEIT RAGQLIASST
FQNMTVYTLV ALLYLVLSLP LMFGVNQIGK RLALRKSR
|
|---|
| |