Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2356 |
Symbol | |
ID | 6243842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2643894 |
End bp | 2644853 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642594147 |
Product | diguanylate cyclase with GAF sensor |
Protein accession | YP_001858577 |
Protein GI | 186477107 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2203] FOG: GAF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.10775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGAC CGCCTATCCC CGACAACGAA AGCGAGCGCG TGGAGACGCT GCGTTCGCTG CATATCCTCG ATACACCGCC AGAAGAACGG TTCGACCGTC TGACGCGCCT CGCGCGACGC CTGTTCGGCG TGCCCATTGC CGCCGTGACG CTGGTCGACA GCCATCGACA ATGGTTCAAG TCGCATCCCG GCCTCGAAGC CTCCGAAACG CCGCGCGACG TGTCCTTCTG TGGTCATGCC ATTGCCGACG ACGACCTGTT TCTCGTGAAC GACGCATCGC TCGACGTGCG CTTCGCCGAC AATCCGCTGG TAACGGGCGA CCCGAACATC CGCTTCTATG CGGGCTATCC GCTTACCGTC AGCAACGGCA GCCGGCTCGG CACACTGTGT CTGATCGATG TGAAGCCACG TGCGCTCGAT GACGAAGAGC GGGTGCTGTT GCGCGATCTT GCACGCATGG CCGAGCAGGA AATCGCCGCG GTGCAGCTCG CAACCACCGA CGAGCTGACG GGCCTGTCGA ATCGCCGTGG CTTCGAAGCG CTCGCGCAGC ACGCGATCAA ACACTGCAAG CGTGCGCAGA AGCCTGCGTC GCTGCTGTTC TTCGATCTGA ACGGTTTCAA GCAGATCAAC GACGTGTTTG GTCACGCGGA AGGGGACCGC GCGTTGATTG CATTTGCAGC GGTATTGCGC ACGGCGCTGC GCGACAGCGA TGTGATCGGC CGGCTAGGCG GCGACGAGTT CGTCGTGCTG CTGACCGATT CGGATCAGCA AGGCACGCTG CAGACCATCG AGCGGCTCAG GCATCAGCTG GACCTGCAGA ACCAGTCGGC GCAGGCGCCT TATCAGCTGC ATTGCAGCGT GGGCACGGCG ACATACACGC CCGACAGTCC GCGGAGCATC GATGATCTGC TCGCGCAAGC CGACGTCGCG ATGTACGCGA ACAAGCGCGC ACAACGCTAA
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Protein sequence | MLRPPIPDNE SERVETLRSL HILDTPPEER FDRLTRLARR LFGVPIAAVT LVDSHRQWFK SHPGLEASET PRDVSFCGHA IADDDLFLVN DASLDVRFAD NPLVTGDPNI RFYAGYPLTV SNGSRLGTLC LIDVKPRALD DEERVLLRDL ARMAEQEIAA VQLATTDELT GLSNRRGFEA LAQHAIKHCK RAQKPASLLF FDLNGFKQIN DVFGHAEGDR ALIAFAAVLR TALRDSDVIG RLGGDEFVVL LTDSDQQGTL QTIERLRHQL DLQNQSAQAP YQLHCSVGTA TYTPDSPRSI DDLLAQADVA MYANKRAQR
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