| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2314 |
|---|
| Symbol | |
|---|
| ID | 6243800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2598927 |
|---|
| End bp | 2599784 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642594105 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001858535 |
|---|
| Protein GI | 186477065 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.106709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGC CGACGACCCG GGCGTTCGAC CCGCACGCGG CGACGCCTTG CGGCCCTGTG
TCCCTGGTTT TGGGGTTGTG GCGCAACCGC CAGCTGATCG CGCAGATGAC GCGTCGCGAG
GTGCTCGGCC GCTATAAGGG TTCAGCGATG GGACTCGCCT GGTCTTTTGT CCAGCCGCTG
TTCATGCTGA CCGTCTACAC CTTCGTGTTT TCAGAGGTGT TCAAGGCGCG TTGGGGCGGT
GCGGGCGCCG TGCAGAGCAA GACCGAGTTC GCCGTGCTGC TGTTCGTCGG GCTGATTGTG
CTGAACCTGT TTTCGGAAGT GATCAACCGC TCGCCCACGC TGGTGATCGC GAACGTCAAT
TTCGTGAAGA AAGTGGTGTT TCCGATCGAA GTTCTGCCGG TCTCCACGAT GGGCGCGGCG
CTCTTCCACA GTCTGGTGAG TGTTGCCGTG CTGTTGTGCG CGATCCTGAT TTTCAACGGC
GGCCTGCCAT GGACGGTCGT GTTCTTTCCT CTGGTGCTGC TGCCGCTCGT CATCGTCACG
CTGGGGCTGG CGTGGATCCT CGCTTCGCTC GGCGTTTTCC TGCGTGACGT GGGGCAAACC
ATCTCGCTGC TGACCACGGT CCTGATGTTT CTTTCGCCTG TGTTCTATCC TGTGGACGCG
GTGCCGCCGC GCTTTCAGCC GTTTATCATG GCCAACCCGC TCACATTCGT GATCGAGCAG
GCGCGCGACG TGCTCGTTTG GGGGAAGCTG CCGAACTGGC TGGGGCTGGC CGTCTACCTG
ATCGCGGCGT GTGTCGTCGC CTGGGCTGGC TATGCGTGGT TCCAGAAGAC AAGAAAGGGG
TTCGCCGATG TCCTCTGA
|
|---|
| Protein sequence | MNVPTTRAFD PHAATPCGPV SLVLGLWRNR QLIAQMTRRE VLGRYKGSAM GLAWSFVQPL
FMLTVYTFVF SEVFKARWGG AGAVQSKTEF AVLLFVGLIV LNLFSEVINR SPTLVIANVN
FVKKVVFPIE VLPVSTMGAA LFHSLVSVAV LLCAILIFNG GLPWTVVFFP LVLLPLVIVT
LGLAWILASL GVFLRDVGQT ISLLTTVLMF LSPVFYPVDA VPPRFQPFIM ANPLTFVIEQ
ARDVLVWGKL PNWLGLAVYL IAACVVAWAG YAWFQKTRKG FADVL
|
|---|
| |