| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2289 |
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| Symbol | |
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| ID | 6243775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2567515 |
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| End bp | 2569404 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594080 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001858510 |
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| Protein GI | 186477040 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.195008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.481233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAT CCAAAGCCAG CTGGCTATCC TTCAGCGCTT TTCTGTTCGA CCTGGCTGCC
GTCGCCGGCA CGTGGCTCAT CGCCTACGTG ATCCGTTTCA ACGGCGCCGT GCCTGTGGAT
TTCCGCGACG GCGCGCTGCA CGCGCTCATC TGGGTGCTGC CCGTCTACGG CGTGATGTTC
CGCATCTTCG GCCTGTACCG CGGCATGTGG GTGTTCGCGA GCCTGCCCGA CCTGATGCGC
ATTTCGAAGG CGGTCGCAAC GGGCGCGTTG CTGGCGATGA TTCTCGCCGT GATGATCCAG
CCGGTCCCGA TCATTCCGCG TTCGGTGCTG CTGGTCTCGC CGCTGCTGCT GTTCCTCGCG
ATGGGCGGCT CGCGGGCGCT GTATCGGGCG GCGAAGGAGT TCTATCTGTA CGGCGGCCTC
GTCGCGCAGG GCAAGCCTGT CGTCGTGATT GGCGCGGGCA CGGCGGGCGC GATGCTCGCG
CGCGAACTGT CCCGTTCGAG CGAATGGCGC CTGATCGGTT TGCTGGATGA CGACGTGTCA
AAGCAGGGCC GCGAGATTTA CGGCTACAAG GTGCTCGGCC CGATCAGCAA GCTGCCGGAA
ATCGCCGAGG CGATGAAGAC GGAGTACGCG ATCATCGCGA TTCCTTCGGC GCCCGTCGAA
CAACAGCGCC GCGCGGCCAC GCTGTGCGTG CGCGCTGGCG TGCGCGCGAT GGTGCTGCCC
GCACTGACGG ATATGACGGA AGGGCAGGCG TCGATGTCGC GCGTGCGTCA TATCGATCTG
GAAGATCTGC TCGGACGCGA GCCCGTGCAT ATCGACACGC CGCACGTCGA AGCGCTGCTG
CATGCGCGCG TCGTGATGGT GACGGGCGCG GGCGGATCGA TCGGCTCGGA GCTGTGCCGC
CAGATCCTGC GCTTCAAGCC CGCCCAACTG ATCGCCTTCG ATATCTCCGA GTACGCGATG
TACCGCTTGG TCGAAGAGTT GCTCGAACGC TTTCCGGGGC TTTCCATCGT GCCGGTGATC
GGTGACGCGA AGGATTCACT GCTGCTCGAT CAGGTGATGG CGCGCTTCAC GCCGCACATC
GTCTATCACG CGGCCGCCTA CAAACACGTC CCGCTGATGG AAGAGCAGAA CGCATGGCAG
GCCGTGCGCA ACAACGTGCT CGGCACCTAC CGCGTCGCGC GCGCAGCGAT TCGCCATGAC
GTGAAGCGCT TCGTGCTGAT TTCGACCGAC AAGGCCGTCA ATCCGACCAA CGTGATGGGC
GCGAGCAAGC GTCTCGCGGA AATGGCGTGT CAGGCGCTGC AGCAGACCAG CGAGCGCACG
CAGTTCGAAA CAGTGCGCTT CGGCAACGTG CTCGGCAGCG CGGGCAGCGT GATCCCCAAG
TTCCAGCAGC AGATCGCGAA GGGTGGCCCC GTCACGGTCA CGCACCCGGA AATCACGCGC
TTTTTCATGA CGATTCCGGA GGCGTCGCAG CTCGTGCTGC AGGCATCGAG CATGGGTCAC
GGCGGCGAAA TCTTCATTCT CGACATGGGC GAGCCGATGA AGATCGTCGA TCTCGCGCGC
GACCTGATCC GTCTGTACGG ATTCACCGAA GAACAGATCC GTATCGAGTT CACGGGTTTG
CGCCCCGGTG AAAAGCTCTA TGAAGAATTA CTCGCCGACG AGGAAACCAC AACGCGCACG
CCGCATCCGA AGCTGCGTAT CGCCCAGGCG CGCGGCGTGC CCGACAATCT GCTCGACGAA
CTGTTGCCGT GGCTGATGCA GCATCGCGTG CTGACGGACG ACGAAGTGCG CCGCGATCTG
CGGCGCTGGG TTACCGAATA TCAGCCGACG CTGGCCGCGC CGCCGCTGCG CAGCGTGCCG
CCGCCAGCGG GCAAGCGGGC ATTGATGTAA
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| Protein sequence | MLRSKASWLS FSAFLFDLAA VAGTWLIAYV IRFNGAVPVD FRDGALHALI WVLPVYGVMF
RIFGLYRGMW VFASLPDLMR ISKAVATGAL LAMILAVMIQ PVPIIPRSVL LVSPLLLFLA
MGGSRALYRA AKEFYLYGGL VAQGKPVVVI GAGTAGAMLA RELSRSSEWR LIGLLDDDVS
KQGREIYGYK VLGPISKLPE IAEAMKTEYA IIAIPSAPVE QQRRAATLCV RAGVRAMVLP
ALTDMTEGQA SMSRVRHIDL EDLLGREPVH IDTPHVEALL HARVVMVTGA GGSIGSELCR
QILRFKPAQL IAFDISEYAM YRLVEELLER FPGLSIVPVI GDAKDSLLLD QVMARFTPHI
VYHAAAYKHV PLMEEQNAWQ AVRNNVLGTY RVARAAIRHD VKRFVLISTD KAVNPTNVMG
ASKRLAEMAC QALQQTSERT QFETVRFGNV LGSAGSVIPK FQQQIAKGGP VTVTHPEITR
FFMTIPEASQ LVLQASSMGH GGEIFILDMG EPMKIVDLAR DLIRLYGFTE EQIRIEFTGL
RPGEKLYEEL LADEETTTRT PHPKLRIAQA RGVPDNLLDE LLPWLMQHRV LTDDEVRRDL
RRWVTEYQPT LAAPPLRSVP PPAGKRALM
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