Gene Bphy_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2237 
Symbol 
ID6243723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2510180 
End bp2511367 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID642594028 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001858458 
Protein GI186476988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.937762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCGC ACCCCAAGAA GAACAAACTG AGCAGCACCT TGCGCCGCTT CACGCGCGCC 
GCCGCGATCG GCGCGCTGTT CGGCGCCGCC GCCGCGCACG CGGACATCAA GGTCGGCATC
GACCTGTCGA GCACGGGGCC CGCCGCCGCA ATCGGCATCA CGAGCAAGAA CGCGATGCTG
ATGTGGCCGA AGACGATTGC CGGACGGCCG GCGCAATACA TCGTGCTCGA CGACGGCTCC
GATCCGGGCG CGGCCGTGCG CAACATCCGC AAGCTGATCA ACGAAGATCA TGTCGACGTG
GTCGTCGGCC CGAACATCAC GCCCGCAGCG CTCGCCGCGC TCGATCCCGT CGCCGAAAGC
CAGACGCCGA TGATCACGCT GATCGGCTCC GCAAGCGTGG TCGAGCCGCA GGAAGGCAAG
AAGATCTGGG CGTTCAAGAT GGCGCAGACG GACAGCGCGA TGGCCGACGT GATGACGCGC
TACATGTCGA ACCACAACGT GAAGACGGTC GGCTTCATCG GCTTCGCGGA CAGCTATGGC
GACAGCTGGC TCAACGAGTT CACGAAGTTC GCGGCGCTGC GCCACATTCA GGTGATCGCG
ACCGAGCGCT TCAATCGCAC GGACGCGAGC GTCACGGGCC AGATACTCAA GCTGATGGCG
GCGAAGCCCG ATGCGGTGCT GATCGCGGGT GCGGGCACGC CAACCGTGCT GCCGCAGCGC
ACGCTCGTCG AGCGCGGCTA TAAAGGCGCG ATCTATCAGA CGCACGGCAT CGCAACGCCG
GAGTTCATCA AGCTCGGCGG CAAGGATGTC GAAGGCACGC TGTTTCCGAC GCAGCCCGTC
GTCGTCGCAC GCACGCTGCC CGCCGATCAT CCCGCGAAGA AGGCCGCGCT GGCTTTCGTC
GACGCGTATG AAAAGCAATA TGGACCCAAC ACGGTCACGC AGTTCGCGGG CGATGCCGCA
GGCGTCTATC CGCGTCTGCA GGATGCCGTT GCGCGCGCGT TGAAGACGGC GCAGCCGGGC
ACGCCGGAGT TTCGCGCGGC GCTGCGCACA GAGCTCGAGC ATGCCCATGA ACTCGTGGTG
CCGAACGGCG TCGTGAATAC GAGCGCGAAG GACCACGTCG GCCTCGACCA GCGGGCGAGC
GTAATGGGCG TCATCAAGGG CGGGAAGTTC ACTTACCTCA GCCAGTGA
 
Protein sequence
MSSHPKKNKL SSTLRRFTRA AAIGALFGAA AAHADIKVGI DLSSTGPAAA IGITSKNAML 
MWPKTIAGRP AQYIVLDDGS DPGAAVRNIR KLINEDHVDV VVGPNITPAA LAALDPVAES
QTPMITLIGS ASVVEPQEGK KIWAFKMAQT DSAMADVMTR YMSNHNVKTV GFIGFADSYG
DSWLNEFTKF AALRHIQVIA TERFNRTDAS VTGQILKLMA AKPDAVLIAG AGTPTVLPQR
TLVERGYKGA IYQTHGIATP EFIKLGGKDV EGTLFPTQPV VVARTLPADH PAKKAALAFV
DAYEKQYGPN TVTQFAGDAA GVYPRLQDAV ARALKTAQPG TPEFRAALRT ELEHAHELVV
PNGVVNTSAK DHVGLDQRAS VMGVIKGGKF TYLSQ