| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2209 |
|---|
| Symbol | cobS |
|---|
| ID | 6243695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2482812 |
|---|
| End bp | 2483561 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594000 |
|---|
| Product | cobalamin synthase |
|---|
| Protein accession | YP_001858430 |
|---|
| Protein GI | 186476960 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0333047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGC TGCGTTACTT TTTCACGGCG CTCGGCTACT TCACGCGCGT GCCCGTGCCG
CGCTGGGTCG GCTACGAACC GCATTATCTG AACGCGGCAG CGCGTTACTT TCCACTGGTG
GGCGCGCTGG TCGGCGCGGC GGGCGCGAGT GTATACATGG CGGCCTTGCG CATCTTTCCA
GCAGGCGTCG CGGTGCTTCT GTCGATGGCC ACGACGCTGC TCATCACGGG CGCATTCCAC
GAAGACGGGC TGGCCGATTG CGTCGATGCA TTCGGCGGAG CGTATGCGCG CGACAACACG
TTGCGCATCA TGCACGACTC GCGCATCGGC GCCTTCGGGG CGATTGCGCT CTTCGTCGCG
CTCGCGCTGA AGTGGCAAAC GCTCGCTACG TTGCCGCCAC TGCGCGCGGC GTGGCTGATG
ATCGCGGCGC ATGCCGCGAG CCGCGCATGC GCGATCAGCT ATCTCGTCAC GCTCGATTAC
GTGCGCGCCG AAGGCAAGGC CAGGCCCGTT GCACAACGCA TGTCCCGCAA CGCGTTTGGC
TGCGCTATCT TTCTGGGTAT GCCGTGGCTT TTCTGGCCGC AGTGGCGCGC CGGTTGCATC
GCGCTGATCG TGCTGATTGC ATTGCGCTTC ATGCTGGGCC GCTATTTCGT CAAACGCATC
GGCGGCTATA CGGGTGACTG CCTGGGCTTT GCGCAGCAGG TCTTCGAACT GGCCATCTAT
CTGATGGGAC TCGCATGGAT ATCGTTCTGA
|
|---|
| Protein sequence | MNELRYFFTA LGYFTRVPVP RWVGYEPHYL NAAARYFPLV GALVGAAGAS VYMAALRIFP
AGVAVLLSMA TTLLITGAFH EDGLADCVDA FGGAYARDNT LRIMHDSRIG AFGAIALFVA
LALKWQTLAT LPPLRAAWLM IAAHAASRAC AISYLVTLDY VRAEGKARPV AQRMSRNAFG
CAIFLGMPWL FWPQWRAGCI ALIVLIALRF MLGRYFVKRI GGYTGDCLGF AQQVFELAIY
LMGLAWISF
|
|---|
| |