Gene Bphy_2196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2196 
Symbol 
ID6243682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2471005 
End bp2471877 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content62% 
IMG OID642593987 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001858417 
Protein GI186476947 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0444422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.714691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG CCGACGAGGC CCGCGCCGCA TCGGAACAGT CCGACGCAGC GCTCGCCGCG 
CCCGCCACCG ATTCGACGCC CAACACGGTC GACGGCATTG CTTTCGCTCG CCTGTACGGC
GAGCCCCTCT TCAAGCTGCC GCAGGATCTA TACATTCCGC CCGACGCGCT CGAAGTCTTC
CTGGAGACTT TCGAAGGCCC GCTGGACCTG TTGCTGTACC TGATCCGCAA GCAGAACTTC
AACGTGCTCG ACATTCCGAT GGCCGACGTG ACGGCCCAGT ACCTCGGCTA TGTCGAACAG
CTGCGCAAGA CCAATCTCGA ACTTGCCGCC GAATATCTGC TGATGGCCGC GATGCTGATC
GAGATCAAGT CGCGCATGCT GCTGCCCGTG AAGAAGGCGG ATACAGGCGA AGAAGCGGAA
GACCCGCGCG CCGAACTGGT GCGCCGCCTG CTCGAATACG AGCAGATGAA GCTTGCGGCG
CAGCGACTCG ACCAGTTGCC GCAGCTCGGG CGCGATTTCC TGCGCGCCGA GGTGTACATC
GAGCAGAGCA TCACGCCGCG CTTTCCCGAT GTGAACACGG ACGACCTGCG TTCCGCGTGG
GCCGACGTGA TCAAGCGAGC GAAGCTGGTT CAGCATCACA AGATTTCGCG TGAGGAACTG
TCCGTGCGCG AACACATGAG CGTGATCCTG CGCAGGCTGC AGAACGCCCG TTTCATGGAG
TTCTCCGAGC TGTTCGACAC GACGCGCGGC GTACCCGTCG TGGTCGTAAA CTTCATCGCG
ATGCTGGAAC TGTCGCGTGA ATCGCTGATC GAGATCACGC AGGCCGAGCC TTTCGCGCCG
ATTTACGTGC GGCTGGCATA CCTGCCCGCC TGA
 
Protein sequence
MTTADEARAA SEQSDAALAA PATDSTPNTV DGIAFARLYG EPLFKLPQDL YIPPDALEVF 
LETFEGPLDL LLYLIRKQNF NVLDIPMADV TAQYLGYVEQ LRKTNLELAA EYLLMAAMLI
EIKSRMLLPV KKADTGEEAE DPRAELVRRL LEYEQMKLAA QRLDQLPQLG RDFLRAEVYI
EQSITPRFPD VNTDDLRSAW ADVIKRAKLV QHHKISREEL SVREHMSVIL RRLQNARFME
FSELFDTTRG VPVVVVNFIA MLELSRESLI EITQAEPFAP IYVRLAYLPA