Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2187 |
Symbol | dcd |
ID | 6243673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2455539 |
End bp | 2456108 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642593978 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_001858408 |
Protein GI | 186476938 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0376333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.174723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA AATCCGACAA GTGGATCCGG CGCATGGCCG AAGAGCACAA CATGATCGAG CCGTTCGCGC CGAATCAGGT GCGCGCGACG GAAGACGGTC GCAAGATCGT CAGCTACGGC ACCTCGAGCT ACGGCTACGA CATTCGCTGT GCCGACGAAT TCAAGATCTT CACGAACATC AACTCGACCA TCGTCGATCC GAAGAACTTT GACGAGAAAT CGTTTGTCGA TTTCAAGGGC GACGTCTGCA TCATTCCGCC GAACTCGTTC GCGCTCGCGC GCACGGTCGA ATATTTCCGC ATTCCGCGCA GCGTGCTGAC GGTGTGCCTC GGCAAGTCGA CGTATGCGCG CTGCGGCATC ATCGTCAATG TGACGCCGTT CGAACCGGAG TGGGAAGGGC ACGTCACGCT CGAATTCTCG AATACGACAC CTTTGCCTGC GAAAATCTAC GCGAACGAAG GCGTCGCGCA GGTGCTGTTC TTCGAAAGCG ACGAGATTTG CGACGTGTCG TACGCGGATC GCGGCGGCAA GTATCAAGGT CAGCACGGCG TAACGTTGCC TAAGACGTAA
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Protein sequence | MSIKSDKWIR RMAEEHNMIE PFAPNQVRAT EDGRKIVSYG TSSYGYDIRC ADEFKIFTNI NSTIVDPKNF DEKSFVDFKG DVCIIPPNSF ALARTVEYFR IPRSVLTVCL GKSTYARCGI IVNVTPFEPE WEGHVTLEFS NTTPLPAKIY ANEGVAQVLF FESDEICDVS YADRGGKYQG QHGVTLPKT
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