| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2186 |
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| Symbol | |
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| ID | 6243672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2453172 |
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| End bp | 2455454 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642593977 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001858407 |
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| Protein GI | 186476937 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0975891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCC GTTTTCCCGT CGTCATCATC GACGAAGATT TCCGCTCCGA GAACATCTCG
GGCTCAGGCA TCCGCGCGCT TGCCGAGGCC ATCGAAAAAG AAGGCGCGGA AGTGCTGGGT
CTCACGAGCT ATGGCGATCT GACGTCGTTT GCGCAGCAGT CGAGCCGCGC GTCGTGCTTC
ATCCTGTCGA TCGACGATGA CGAACTGCTG CCCTACGTCG AGAACAACGA CGGCGAGGCG
CCCGACGTCG CGCCCGCGAT CGTCGATCTG CGCGCGTTCG TCGAGGCGGT GCGCAAGCGC
AACGCGGACA TCCCGATCTT CCTGTACGGC GAAACGCGCA CCTCGCGTCA CCTGCCGAAC
GACATCCTGC GCGAACTGCA CGGCTTCATT CACATGTTCG AGGACACGCC GGAGTTCGTC
GCGCGGCACA TCATCCGCGA AGCGAAGGTA TATCTGGATT CGCTCGCGCC GCCGTTCTTC
AAGGAGCTGG TGCAGTATGC GGACGAAGGC TCGTACTCGT GGCACTGTCC GGGCCACTCG
GGCGGCGTCG CGTTCCTGAA AAATCCGCTT GGCCAGATGT TCCATCAGTT CTTCGGTGAG
AACATGCTGC GCGCGGACGT CTGCAATGCC GTCGACGAAC TCGGCCAGCT GCTCGATCAT
ACGGGCCCGG TGGCGGCATC CGAGCGCAAC GCCGCACGCA TCTTCAGCGC CGATCACCTG
TTCTTCGTCA CCAACGGCAC GTCCACGTCC AACAAAATCG TCTGGCACGC GACGGTCGCG
CCGGGCGACA TCGTGCTGGT GGACCGCAAC TGCCACAAGT CGATCCTGCA CGCGATCACG
ATGACGCATG CGATCCCCGT GTTCCTCACG CCGACGCGCA ATCACTTCGG CATCATCGGG
CCGATCCCGC GCGACGAGTT CAAGCCGGAA AACATCCGCA AGAAGATCGA GGCGAATCCG
TTCGCACGCG AAGCGCTCGC GAAGAACCCG AATCTCAAGC CGCGCATTCT GACGATCACG
CAAAGCACCT ATGACGGCGT GATCTACAAC GTCGAGATGA TCAAGGACCT GCTCGGCGAT
CTGCTCGACA CGCTGCATTT CGACGAAGCG TGGCTGCCGC ACGCCGAGTT CCACGAGTTC
TATCAGGACA TGCACGCGAT CGGCGCGGGC CGTCCGCGCA CGGGCGCGCT GGTGTTCGCG
ACGCACTCGA CGCACAAGCT GCTGGCAGGC ATTTCGCAGG CTTCGCAGAT CGTCGTGCAG
GATTCGGAGA ACAGCACGTT CGACCGCCAT CGGTTCAATG AGGCTTATCT GATGCACACG
TCGACGAGCC CGCAGTACGC GATTATCGCG TCGTGCGACG TGGCCGCCGC GATGATGGAG
CCGCCGGGCG GCACGGCGCT GGTGGAAGAA TCGATCGCCG AGGCGCTCGA TTTCCGCCGC
GCGATGCGCA AGGTCGACGC CGAATACGGC GACGACTGGT TCTTCAAGGT CTGGGGTCCC
GAAGAGCTGG CGGAAGAGGG CATCGGCTCG CGCGACGACT GGATGCTGCG TCCGAACGAC
CGCTGGCACG GCTTCGGCCC GCTCGCGGAC GGCTTCAACA TGCTGGACCC GATCAAGGCG
ACGATCATTA CGCCGGGCCT CGACGTCGAC GGCGAATTCG GCGAGACGGG CATTCCCGCT
GCGATCGTCA CGAAGTATCT GGCCGAGCAC GGCATCATCG TCGAGAAGAC GGGTCTGTAT
TCGTTCTTCA TCATGTTCAC GATCGGCATT ACGAAGGGCC GCTGGAACTC GATGGTCACG
GAACTCCAGC AGTTCAAGGA CGACTACGAC AATAACCAGC CGCTGTGGCG CGTGCTGCCC
GAGTTCGTCG CGCAACATCC CGCATACGAG CGCATCGGCC TGCGCGATCT GTGCGAGCAG
ATCCACAGCG TCTATCGTGC GAACGACATC GCGCGTCTCA CGACGGAGAT GTACCTGTCG
AGCATGGAGC CGGCCATGAA GCCGTCCGAC GCGTTCGCGA AGCTCGCGCA CCGCGAGATC
GACCGCGTGC CCATCGACGA ACTGGAAGGC CGAGTCACGT CGATCCTGCT GACGCCGTAT
CCGCCGGGCA TTCCGCTGCT GATTCCGGGC GAGCGCTTCA ACAGGACCAT CGTCAATTAC
CTGCGCTTCG CACGCGAGTT CAACGAGCGC TTCCCTGGCT TCCATACGGA TATTCACGGG
CTGGTCGGCG AAACGATCAA CGGGCGCATC GAGTATTTCG TCGATTGCGT GCGCGATTCG
TGA
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| Protein sequence | MKFRFPVVII DEDFRSENIS GSGIRALAEA IEKEGAEVLG LTSYGDLTSF AQQSSRASCF
ILSIDDDELL PYVENNDGEA PDVAPAIVDL RAFVEAVRKR NADIPIFLYG ETRTSRHLPN
DILRELHGFI HMFEDTPEFV ARHIIREAKV YLDSLAPPFF KELVQYADEG SYSWHCPGHS
GGVAFLKNPL GQMFHQFFGE NMLRADVCNA VDELGQLLDH TGPVAASERN AARIFSADHL
FFVTNGTSTS NKIVWHATVA PGDIVLVDRN CHKSILHAIT MTHAIPVFLT PTRNHFGIIG
PIPRDEFKPE NIRKKIEANP FAREALAKNP NLKPRILTIT QSTYDGVIYN VEMIKDLLGD
LLDTLHFDEA WLPHAEFHEF YQDMHAIGAG RPRTGALVFA THSTHKLLAG ISQASQIVVQ
DSENSTFDRH RFNEAYLMHT STSPQYAIIA SCDVAAAMME PPGGTALVEE SIAEALDFRR
AMRKVDAEYG DDWFFKVWGP EELAEEGIGS RDDWMLRPND RWHGFGPLAD GFNMLDPIKA
TIITPGLDVD GEFGETGIPA AIVTKYLAEH GIIVEKTGLY SFFIMFTIGI TKGRWNSMVT
ELQQFKDDYD NNQPLWRVLP EFVAQHPAYE RIGLRDLCEQ IHSVYRANDI ARLTTEMYLS
SMEPAMKPSD AFAKLAHREI DRVPIDELEG RVTSILLTPY PPGIPLLIPG ERFNRTIVNY
LRFAREFNER FPGFHTDIHG LVGETINGRI EYFVDCVRDS
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