Gene Bphy_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2183 
Symbol 
ID6243669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2449844 
End bp2451250 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content65% 
IMG OID642593974 
Productargininosuccinate lyase 
Protein accessionYP_001858404 
Protein GI186476934 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.013453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCC AACTGCATAA AAAAGGCGAA GCCTGGTCGG CTCGCTTCTC CGAGCCGATG 
TCGGAACTCG TCAAGCGCTA CACGTCGTCG GTATTCTTCG ACAAGCGTCT CGCGCTCGTC
GACATCGAAG GCTCGCTCGC GCACGCGTCG ATGCTGGCCG CGCAAAAGAT CATCAGCGCC
GACGACCTCG CCGCGATCCA GCGCGGCATG GCGCAGATCC AGGGTGAAAT CGAGCGCGGC
GAGTTCGAAT GGCAGCTCGA TCTCGAAGAC GTGCACCTGA ACATCGAAGC GCGGCTCACC
GCCCTGATCG GCGACGCAGG CAAGCGCCTG CACACGGGCC GCTCGCGCAA CGACCAGGTC
GCGACCGACA TCCGCCTGTG GCTGCGCGGA GAAATCGACC GTATCGGCGA TCTGCTGAAG
GGCCTGCGCA GCGCGCTGCT CGATCTTGCA GAACAGAACG CGGACACGAT CATGCCGGGC
TTCACGCACC TGCAGGTCGC ACAGCCAGTG ACGTTCGGCC ATCACCTGCT CGCCTACGTC
GAAATGTTCT CACGTGACGC CGAGCGCATG CTCGACACCC GCAAGCGCGT GAACCGCCTG
CCTCTCGGCG CAGCGGCGCT CGCCGGCACC AGCTACCCGA TCGACCGTCA CGCCGTCGCG
AAGACGCTCG GCTTCGACGG CATTTGCGCG AACTCGCTCG ACGCCGTGTC CGATCGCGAC
TTCGCGATCG AATTCACGGC CGCTTCGGCG CTCGTGATGA CGCATGTGTC GCGCTTCTCG
GAAGAACTCG TGCTGTGGAT GAGCCCGCGC GTCGGCTTCA TCGATATTGC CGACCGCTTC
TGCACCGGCT CGTCGATCAT GCCGCAGAAG AAGAACCCCG ACGTGCCCGA ACTCGCACGC
GGCAAGACGG GCCGCGTCAA CGGCCACCTG ATGGCGCTGC TCACGCTGAT GAAGGGCCAG
CCGCTCGCAT ACAACAAGGA CAATCAGGAA GACAAGGAAC CGCTGTTCGA TACCGTCGAC
ACCGTCGCCG ATACGCTGCG CATCTTCGCG GAGATGGTCG CGGGCATCAC GGTGAAGTCG
GAGAACATGC GCGGCGCAGC GCTGCAAGGC TTCTCGACGG CAACCGATCT CGCCGATTAC
CTCGTCAAGC GCGGCCTGCC GTTCCGCGAC GCGCACGAAG CCGTCGCGCA CGCAGTGAAG
GTGTGCGACG ATCGCGGCTG CGATCTGTCG GATCTGACGC TCGACGAAAT GAAGGCGGAA
TTGCCGAACG TCGCTGCGCT GCTGGGCGAC GACGTGTTCG GCTATCTCAC GCTCGAAGGA
TCGGTTGCAA GCCGGAATCA TGCGGGCGGC ACGGCGCCGG ATCAGGTGCG CGCTGCCATC
GCGGCTGCAC GGGCTGCCCT CGGCTAA
 
Protein sequence
MTSQLHKKGE AWSARFSEPM SELVKRYTSS VFFDKRLALV DIEGSLAHAS MLAAQKIISA 
DDLAAIQRGM AQIQGEIERG EFEWQLDLED VHLNIEARLT ALIGDAGKRL HTGRSRNDQV
ATDIRLWLRG EIDRIGDLLK GLRSALLDLA EQNADTIMPG FTHLQVAQPV TFGHHLLAYV
EMFSRDAERM LDTRKRVNRL PLGAAALAGT SYPIDRHAVA KTLGFDGICA NSLDAVSDRD
FAIEFTAASA LVMTHVSRFS EELVLWMSPR VGFIDIADRF CTGSSIMPQK KNPDVPELAR
GKTGRVNGHL MALLTLMKGQ PLAYNKDNQE DKEPLFDTVD TVADTLRIFA EMVAGITVKS
ENMRGAALQG FSTATDLADY LVKRGLPFRD AHEAVAHAVK VCDDRGCDLS DLTLDEMKAE
LPNVAALLGD DVFGYLTLEG SVASRNHAGG TAPDQVRAAI AAARAALG