| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2179 |
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| Symbol | hemC |
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| ID | 6243665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2443380 |
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| End bp | 2444363 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642593970 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001858400 |
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| Protein GI | 186476930 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.230446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000767539 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTCCG AGACGCTTGC GCCCACGCCG CCCGCCACGC TTGTGATCGC GTCGCGTGAA
AGCCGGCTTG CAATGTGGCA GGCCGAGCAC GTGCGGTGTG CGCTGCACAA ATTATATCCA
TCTTGTGACG TAAAAATCCT CGGAATGACG ACTCGCGGCG ATCAGATTCT CGATCGCACG
CTGTCGAAGG TCGGCGGCAA AGGGTTGTTC GTGAAGGAAC TGGAGAACGC GCTCGCCGAC
GGTCGCGCCG ATCTCGCCGT TCATTCGCTC AAAGACGTGC CCATGGAACT GCCCGAGGGC
TTCGTGCTGT CGACCATCAT GGAGCGCGAA GATCCGCGCG ACGCGTTTGT CTCGAACCAG
TACGACTCGC TGGCTGCGCT GCCGGCCGGC AGCGTGGTCG GCACGTCGAG CCTGCGCCGC
GAAGCGATGC TGCGCGCGCG TTATCCCGAG CTTGTCGTGA AGCCGCTGCG CGGCAATCTG
GACACGCGGC TTGGCAAACT CGACCGCGGC GACTATGCGG CCATCATTCT CGCTGCTGCG
GGCCTCAAGC GCCTCGGCCT CGGCGAGCGC ATCCGTTCGC TGCTCGATCC CGCGGACAGC
CTGCCCGCTG CGGGTCAAGG CGCGCTCGGC ATCGAGATTC GCGCCGGCCG CGACGATCTT
GCTGCATGGC TCGCGCCGCT GCATCACGAG CACACGGCGG CTGCCGTCGA AGCAGAGCGC
ATGGTGTCGC GCACGCTGGG CGGCAGTTGC GAAGTGCCCC TCGCCGCGTA TGCGACATGG
CACGACGGCG CGCTGCATTT GCGCGGCATC GTCGCCACGC CGGACGGCGA GCGGGTGCTG
AGCGCGCAGG CGTCGGCGCC TGCAGCCACG ACGGACGCCG CGCTCGAACT GGGTCGCGAG
GTCGCCAGCC AGCTAGAGGC GCAAGGCGCG CTCGACATTG TGCGCGCGCT CTCCACCGCA
AGCGGCCCGG CCGCTTCCGC GTGA
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| Protein sequence | MNSETLAPTP PATLVIASRE SRLAMWQAEH VRCALHKLYP SCDVKILGMT TRGDQILDRT
LSKVGGKGLF VKELENALAD GRADLAVHSL KDVPMELPEG FVLSTIMERE DPRDAFVSNQ
YDSLAALPAG SVVGTSSLRR EAMLRARYPE LVVKPLRGNL DTRLGKLDRG DYAAIILAAA
GLKRLGLGER IRSLLDPADS LPAAGQGALG IEIRAGRDDL AAWLAPLHHE HTAAAVEAER
MVSRTLGGSC EVPLAAYATW HDGALHLRGI VATPDGERVL SAQASAPAAT TDAALELGRE
VASQLEAQGA LDIVRALSTA SGPAASA
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