| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2178 |
|---|
| Symbol | |
|---|
| ID | 6243664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2441320 |
|---|
| End bp | 2443380 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642593969 |
|---|
| Product | bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase |
|---|
| Protein accession | YP_001858399 |
|---|
| Protein GI | 186476929 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.280216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000563849 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCA GCTCGAATCC GACACCCGGT GCATTCCCGT CCAAGGACGG CGCAGGCTCG
CCGCATGCGT CGGGCGCGCG CCTGACGGTC GTGCTGACCC GCCCGGCGGG GCAGTCCGAG
GCGCTCGCGA GGACGCTGCA TGATGCCGGT GTCGCAACCG TCGAATTCCC CCTCATCGAG
ATCGCCGCAA CCGACGACGC AACGCCGCTG CGTGCGGCGC TCGCGTCGCT GGAAAAGTAC
GCGCTCGTGG TGTTCGTGTC GCCCAATGCC GTCGACTACG CATTCGCAAA CCACGACGCG
ATCTGGCCGC ATGCGCTGCC TATCGGCGTG GTCGGGCCTG GTAGCGTCGC GGCGCTCGCG
AAGCACGGCG TCGAGGCGCC CGCGTACCAG GTGATCAGCC CCGGCGCAGC CGCCGACGAC
AACGGCGACG GCGCACGCTT CGATTCAGAG GCGTTGTATT CCGCGCTGGA GGCGTCGCTC
GGCGACAACG CGTTCGAAGG CAAGCGTGTG CTGATCGTGC GTGGCGACGG CGGGCGCGAA
TGGCTCGCCG AACGTCTGCG CGAAGCGGGC GCGGAGGTCG AGACGGTCGC GGCCTACCGG
CGCCTCGTGC CCGAGCCGTC GATCGGGGCG TGGTCGCGCA TTCACGCGCT GCTGTCGGAC
ACATCGACTG CGCGGCACGC GTGGCTCCTG ACGAGTTCCG AAGGCGCGCG CAATCTCGCC
GAACTCGCGC ACGACCATCT GACGAACAGC GAGCAGACCC ATCTGAAGCG CGCGATGTTC
GTCGCGCCCC ACCCGCGCAT CGCGGAAACC GCGCGGGCAT TGGGTTTTGA TAGCATTACG
GTGTCCGGTG CGGGCGATGA GCGCATTGCC CGCACGTTGC TGTCTCTCGC GACACCGCCC
GTAGTTCAAG CGGTCCAGTC CAACCCGGCA CAAGAACGCA TGTCTGATAC CAACGCATCC
ACGACCCCCA CGCCTAATCC CGCGCCGCGG CCCGCGAACA CGCTGCCGCC GAATCAGCCC
TTTACGCCCT ACGAACTGCA GCAGCCCAAC CGTAAAGGCA ACGGACTCGT CTGGGTGGTC
ATCGCGCTGG TGCTCGCCGC GGCGGTCGCG GGCGGCCTTG CGCTGAACCG CAGAATCATC
AAGCTCGACC AGCAGTTGTC GCACCGGCAG CAGGCCAACG ACGCCCAGAT GGCCGAATTG
CGCGTGAAGA CGGATCAGGC CGTCTCGACC GTGCGTCAGG CCGACGCGCA GATCGCGCAG
CTCGAAGGCA AGCTCGCCGA TGCGCAGAAC GCGCAGCAGG CGCTTCAGCA ACAATACGCA
GACCTCGCAC GCAACCGCGA CGACTGGACG ATGGCCGAAG TCGGCCAGAT GCTTTCGGCG
GCGAGCGAGC AACTGCAATT GACGGGTAAC ACGCAGCTCG CGCTGTTCGC GCTGCAAAGC
GCCGACACGC GCCTCGCCGC GTCGGATGGC GCGCAGGTGC TGGCCGTGCG CAAGGCGATC
GCGCAGGACA TCGACAGGCT GAAGTCCGCG CCGTCCACCG ACCTGACAGG CCTCGCCATC
AAGCTCGATA ACGCCATCGA TCAGATCGAC CAGCTGCCGC TGTCGGGCGA GGCGCCGATC
GCGCACGCTA CGCCGCACGC GTCGACGCCG AAGGACGTCG ACCACGTCGC GGCGGCGACG
GGCGAGCCGA AGTGGAAGGT GTGGTGGAAC CAGTTCGTCG CGGGTGTCGG CGAGCAGTTG
ACCAGCCTCG TGCAGGTGCG CCGCATCGAT CACGCCGACG CGATGCTCGT CGCGCCCGAT
CAGGGTTATT TCGTGCGTGA GAATCTGAAG CTGCGTCTGC TGTCCGCGCG TCTCGCGCTG
CTCGCACGCA ACCAGACAAC GCTCAAATCG GATCTTCATG CGGCGGATAG CACGATTGGG
CGCTACTTCG ACGCGTCGTC GAAGAGCGTG CAGACGGTGC GCGACCTCAT CAAGCAGATC
GACGAAGGCT CGGGCGCCGT CGACGTTCCG AACCTGAATA CGAGCCTGCA GGCCGTGCAT
CAATATCGGA ACCGGGGTTA A
|
|---|
| Protein sequence | MAASSNPTPG AFPSKDGAGS PHASGARLTV VLTRPAGQSE ALARTLHDAG VATVEFPLIE
IAATDDATPL RAALASLEKY ALVVFVSPNA VDYAFANHDA IWPHALPIGV VGPGSVAALA
KHGVEAPAYQ VISPGAAADD NGDGARFDSE ALYSALEASL GDNAFEGKRV LIVRGDGGRE
WLAERLREAG AEVETVAAYR RLVPEPSIGA WSRIHALLSD TSTARHAWLL TSSEGARNLA
ELAHDHLTNS EQTHLKRAMF VAPHPRIAET ARALGFDSIT VSGAGDERIA RTLLSLATPP
VVQAVQSNPA QERMSDTNAS TTPTPNPAPR PANTLPPNQP FTPYELQQPN RKGNGLVWVV
IALVLAAAVA GGLALNRRII KLDQQLSHRQ QANDAQMAEL RVKTDQAVST VRQADAQIAQ
LEGKLADAQN AQQALQQQYA DLARNRDDWT MAEVGQMLSA ASEQLQLTGN TQLALFALQS
ADTRLAASDG AQVLAVRKAI AQDIDRLKSA PSTDLTGLAI KLDNAIDQID QLPLSGEAPI
AHATPHASTP KDVDHVAAAT GEPKWKVWWN QFVAGVGEQL TSLVQVRRID HADAMLVAPD
QGYFVRENLK LRLLSARLAL LARNQTTLKS DLHAADSTIG RYFDASSKSV QTVRDLIKQI
DEGSGAVDVP NLNTSLQAVH QYRNRG
|
|---|
| |