| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2164 |
|---|
| Symbol | |
|---|
| ID | 6243650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2426230 |
|---|
| End bp | 2426919 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642593955 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001858385 |
|---|
| Protein GI | 186476915 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00988389 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000000570063 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTTC AAGGCTACGG CCCGATCATC TTTGCCGGCA CGGTGCAGAC CGTGAAGCTG
GCTATCCTGT CGCTCGCGCT CGCATTCCTG CTCGGTCTGC TCGGCGCGGC AGCGAAGCTG
TCGAAGAACC GGGTGACATA CAGCGTCGGC ACGATCTATA CGACGCTGAT TCGCGGCGTC
CCGGATCTCG TGCTGATGCT GCTGCTCTTC TACAGCATCC AGATCTGGCT GAACAATCTG
ACCGACATGC TCGGCTGGGA CCAGATCGAC ATCGATCCGT TCGTCGCCGG CGTCGCCGTG
CTCGGCTTCA TTTACGGCGC GTACTTCACC GAGACATTCC GCGGCGCATT CCTCGCCGTG
CCGCGCGGCC AGCTCGAAGC GGGCGCCGCG TACGGCATGA CGGGCTGGCA GGTATTCTCG
CGGATCATGT TTCCACAGAT GATGCGCTTC GCGCTGCCCG GCATCGGCAA TAACTGGCAG
GTGATGGTCA AAGCGACGGC GCTCGTGTCG ATCATCGGTC TCGCGGACGT CGTCAAGGCG
TCGCAGGACG CCGGCAAAGG CACGTTGCGT TTCTTCTTTT TCACGCTGAT GGCAGGCGCC
ATCTATCTGC TCATCACGAC GGCTTCGAAC TTCGTGCTGA TGTACCTCGA AAAACGCTAC
TCGACTGGCG TGCGCAAGGC GGAACTATGA
|
|---|
| Protein sequence | MLFQGYGPII FAGTVQTVKL AILSLALAFL LGLLGAAAKL SKNRVTYSVG TIYTTLIRGV
PDLVLMLLLF YSIQIWLNNL TDMLGWDQID IDPFVAGVAV LGFIYGAYFT ETFRGAFLAV
PRGQLEAGAA YGMTGWQVFS RIMFPQMMRF ALPGIGNNWQ VMVKATALVS IIGLADVVKA
SQDAGKGTLR FFFFTLMAGA IYLLITTASN FVLMYLEKRY STGVRKAEL
|
|---|
| |