| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2157 |
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| Symbol | |
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| ID | 6243643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2418894 |
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| End bp | 2420573 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642593948 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001858378 |
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| Protein GI | 186476908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.46132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000586134 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGGA CAACCTTGCG CCAGGCATTG GGACCGGCCA GTTTCGTACT GGTCGTGCTC
GCATGCTGGT TCGCCTCCGG CCTGGTCGCG GACCGGATGG TACAGCAAGA ACTGGATACC
GCACTGCGCC AGCAGCGGCA AATGTCCGCC TCGATCGTCT ACAACATGGC CGAAGTGATC
GCGAGCGACC TGGCAATGTC CCGGGCCATA CCCGCGACGA TGGCCGAGCT CGGTGTGATT
CAACAGGCTC TGACGCATTC GCAGAATTAT GCCGCTTCAG GCGTGGACCT GGAACCCGCG
CACCGCGAGG AGCTGTTGAA ATCGCCTGAA CTGGCGGGCA TCAACGGCTT TTTGCGTGAC
GCCCAAGGCT TCTCGGGACT CGACATCATC TGGCTCGTCA ACGCCAACGG CCTGTGCGTC
GCCGCGAGCA ACGCGCAGAA CGCGCATTCG TTCGTCGGTA TCGACATGCG CTCGCGCAGC
TATCTGACCA ACGCGCTGCT TGGCGCCTTT GGCGAGGCGT ACGGCGTCGG CCGCATGAGC
GGCGAGCCCG GCATCTTCAT CTCGGCGCCC GTGTACGACG ACGGGCTGCT GGTCGGCGCG
ATCGTCGCCA AGGTCGGCAT CGCGCGACTG CGCCACTGGG TCGCCCACGC GGGCACCTTC
GTCACCGACG ACAACGGCGT GATCATCATG GCGCACAATG CCGCGCTCGA AGGCCAGGCG
ATGCCAAACT CGCGCGTCAC GCAGATGAAA CCGGCCGAGC GCATGAGCAC GTATCATCGC
GTGCAGTTTC CCGCCGTGCA GATTCAGCCC GTCAAGAGCC AGGTGCGCGG CGATGCGCCG
TGGGTGCCCG CCGACATCGC CGACCAGCTG TACGACATGC CGAGCCAGCC GATCCCGACG
CTCTACCAGT CGCGCAGCGG ACTGAACTCC GGCCTGTCGG CGCATCTCGT CGATCCGCTC
GTCGCCTGGC CCGAACTGAT GCGCAATCAC AAGCGCGATC ATCTGCTCGT CTTCCTGACG
CTCGCGGGCA CGGTGGCGCT CGCGTGGGTG ATCACCGTGT CGTATCTGCG CGAGCGGCGT
CATCACCGCG CGACCCGCGT GCTCGCGGAA CAGCTGCAGT CGGCGAACAC GCTGCTGTCG
GCGGAAGCCC GCCACGATGC GCTGACGGGC GCGCTGTCGC GCCGCTACTT CCTCGACCTG
CTGCGCCATG AGATCGAGCG GGCGCGCGCG ACGGGCGAAC CGCTATGCAT GGCGATCGCC
GACCTCGATC ATTTCAAGCA GATCAATGAC CGCTTCGGGC ACGCGGCGGG CGACCGGGCG
CTCGAACATT TCGTCGACAC GTGCCGCACC GCGCTGCGCG GCAGCGACGC GATCGGCCGG
CTGGGCGGCG AAGAGTTCGG CATCCTGCTG CCGGACACGC CGCTCGGCAC CGGCCTCGAA
GTGGTCGAAC GCCTGCGTGT GCGGCTGAAG ACGATGCCGT CGACGAAGCT GCCGCAATCG
GTGGGCTTGA GCGTAAGTAT CGGCATCACG GAACTGTCGG CGGAGGACTT GCCCGAGCGC
ATCATCAGCC GCGCCGATCA GGCGCTCTAC GCCGCGAAAC AGGGTGGCCG CGACCGCAGC
GAAGCCGTGC CGCCCGACGA CACCGCGCCA CCCGCGCGGG CCCCCGTCAA CGCGTGGTAA
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| Protein sequence | MKRTTLRQAL GPASFVLVVL ACWFASGLVA DRMVQQELDT ALRQQRQMSA SIVYNMAEVI
ASDLAMSRAI PATMAELGVI QQALTHSQNY AASGVDLEPA HREELLKSPE LAGINGFLRD
AQGFSGLDII WLVNANGLCV AASNAQNAHS FVGIDMRSRS YLTNALLGAF GEAYGVGRMS
GEPGIFISAP VYDDGLLVGA IVAKVGIARL RHWVAHAGTF VTDDNGVIIM AHNAALEGQA
MPNSRVTQMK PAERMSTYHR VQFPAVQIQP VKSQVRGDAP WVPADIADQL YDMPSQPIPT
LYQSRSGLNS GLSAHLVDPL VAWPELMRNH KRDHLLVFLT LAGTVALAWV ITVSYLRERR
HHRATRVLAE QLQSANTLLS AEARHDALTG ALSRRYFLDL LRHEIERARA TGEPLCMAIA
DLDHFKQIND RFGHAAGDRA LEHFVDTCRT ALRGSDAIGR LGGEEFGILL PDTPLGTGLE
VVERLRVRLK TMPSTKLPQS VGLSVSIGIT ELSAEDLPER IISRADQALY AAKQGGRDRS
EAVPPDDTAP PARAPVNAW
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