Gene Bphy_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2140 
Symbol 
ID6243626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2402371 
End bp2403657 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content65% 
IMG OID642593931 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_001858361 
Protein GI186476891 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000767539 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCAGG CTTCACCGCT TGAACTGCTG AAGCAGGCGC GCACCCGCTT CACACAAAAA 
GAAATCGCCG CGCATGTCGG CAAGGACATC AAGACGGTGC GCCGCTGGGA AAAGGGCGAA
ACGCCGTGTC CCGCGATGCT CGAGCCAGCG CTGCACGCGC TACTGCACGC AGCGCCGGCG
CGCAACCGGG ACCCAGGCGA CGGATCGCGC GTGCACTTCA TCGACCTGTT CGCCGGCATC
GGCGGCATCC GCATGGGCTT CGAGGCACAC GGCGGCCAAT GCGTGTTCAC CAGCGAGTGG
AACGTCTTCT CCCAGAAAAC CTACCGGGAA AACTTCGGCG AACACTGCGG CGATGCCGCG
CCCCAGCACA CGCTCATCGG CGACATCGTC ACGTTTCCTG CCGAAGCCGT TCCCGAGCAC
GACATCCTGC TCGGCGGCTT TCCGTGCCAG CCGTTTTCGA TCGCGGGCGT CAGCAAGAAA
AACGCGCTCG GCCGGCCGCA CGGGTTCGAA TGCGCGACGC AAGGCACGCT GTTCTTCGAT
GTCGCGCGCA TCATCGCCGC GCGCCGTCCT GCTGCATTTC TGCTCGAAAA CGTGAAGAAC
CTGCTGTCAC ACGACAAGGG CCGCACCTTC GATGTGATCC TGCAGACGCT TCGCGACGAA
CTGGGCTACG AGGTGCACTA CCGGGTGATC GACGGCGCGC ATTTCACGCC GCAGCATCGC
GAACGGATCA TCATGATCGG CTTTCGCGCA CGAACCTCCT TTTCGTGGGA CGACCTGCGC
CTGCCCGAAG AAGGCCCTCG GCTCGCGTCG ATCCTGCATC GCACGGACGG CACGGAACCC
GTGCTGCCGT GGGACGGCGA CCGCTTCTTC GATCACGCTG CGCGCCATGT GCAACCGAAA
TACACGCTGA CGCCTAAGCT CTGGACCTAT CTGCAGAATT ACGCGGACAA GCATCGCGCG
GCGGGCAACG GATTCGGCTA TGGCATGGCG TATCCGCAAA GCGTGACGCG CACGCTGTCG
GCCCGCTATC ACAAGGACGG CAGCGAAATT CTGGTCTACC AAGGGGACAA GCAGCGCCCG
CGCCGCCTGA CGCCGCGCGA GTGCGCACGG CTGATGGGCT TTCCCGACAC CTATCGCATC
CCCGTCAGCG ACACGCAGGC GTACCGCCAG TTTGGCAACA GCGTGGTGGT GCCCGTCATG
CGCGAGGTCG CGCGCATCAT GCTGCCGCAT GTGCTCGCGC TGACGCGCGC GGCGCACGAC
GCCAGCGCTG CAGAACTGGC GGCCTGA
 
Protein sequence
MTQASPLELL KQARTRFTQK EIAAHVGKDI KTVRRWEKGE TPCPAMLEPA LHALLHAAPA 
RNRDPGDGSR VHFIDLFAGI GGIRMGFEAH GGQCVFTSEW NVFSQKTYRE NFGEHCGDAA
PQHTLIGDIV TFPAEAVPEH DILLGGFPCQ PFSIAGVSKK NALGRPHGFE CATQGTLFFD
VARIIAARRP AAFLLENVKN LLSHDKGRTF DVILQTLRDE LGYEVHYRVI DGAHFTPQHR
ERIIMIGFRA RTSFSWDDLR LPEEGPRLAS ILHRTDGTEP VLPWDGDRFF DHAARHVQPK
YTLTPKLWTY LQNYADKHRA AGNGFGYGMA YPQSVTRTLS ARYHKDGSEI LVYQGDKQRP
RRLTPRECAR LMGFPDTYRI PVSDTQAYRQ FGNSVVVPVM REVARIMLPH VLALTRAAHD
ASAAELAA