| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2124 |
|---|
| Symbol | |
|---|
| ID | 6243611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2385932 |
|---|
| End bp | 2387917 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642593916 |
|---|
| Product | DNA topoisomerase IV subunit B |
|---|
| Protein accession | YP_001858347 |
|---|
| Protein GI | 186476877 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.275267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGA AAAAGCCAAA CGCCGCGTAT AGCGAAGCAT CGATCAAGGT GCTCAAAGGC
CTGGAGCCGG TCAAGCAGCG GCCCGGCATG TACACGCGCA CCGAAAATCC GCTGCACATC
ATTCAGGAAG TCATCGACAA CGCATCCGAC GAAGCGCTCG GCGGCTACGG CCGTCAGATC
ACCGTCACGC TGCACGCCGA TCATTCCGTT TCAGTCGAAG ACGACGGCCG TGGTATTCCG
TTCGGCATGC ACCCCGAAGA GCGCGTCCCC GTCGTCGAAA TCGTTTTCAC GCGCCTGCAC
GCCGGCGGCA AGTTCGACAA GGCGGCGGGC GGCGCCTACA CGTTCTCGGG CGGCCTGCAC
GGCGTCGGCG TATCGGTGAC CAACGCGCTG TCCACGCGCC TGGATGTCAC CGTCTGGCGC
GACGGCAAGG TCGCCGAGCT GAGCTTCTCG CACGGCGACG TCATCAAGCC GCTGCAGGTG
CGCGCCGCGA CGAAGGCCGA CAAGAAGTCG GGCACGCGCG TCACGGCGTG GGCCGATCCG
AAATACTTCG ATTCGCCGAA TCTGCCGCTC GGCGAACTGC AACGCCTGCT GCGTTCGAAA
GCCGTGCTGC TGCCGGGCGT GGAAGTCGTT CTCATCAACG AAAAGACAGG CGAGCGCCAA
AGCTGGAAAT ACGAAGACGG CCTGCGTGGC TATCTGATGG AAGGCATGGC GGGCAGCGAC
CTGCTGATCC CGCTGTTCGA AGGGGAACGC TACGCGGAAA GTTCGCGCTC GAACGAAGAA
ACCTTTGCCG AAGGCGAAGG CGCGGCGTGG GTCGTCGCGT GGAGCGAGGA AGGACCGCTC
ACGCGCGAAT CCTACGTCAA TCTGATTCCG ACTCCCGCGG GCGGCACGCA TGAAGCGGGT
CTGCGCGACG GTCTCTTCCA GGCCGTGAAG AGCTTTGTCG AACTGCACAA CCTGCAGCCC
AAGGGCGTGA AGCTGCTCGC GGAAGACGTG TTCGCGCGCG TCTCGTTCGT GCTCTCCGCG
AAGGTGCTCG ACCCGCAGTT CCAGGGGCAA ATCAAGGAGC GTCTGAATAG CCGCGATGCC
GTCAAGCTGG TGTCCTCGTT CGCGCGCCCC GCGCTGGAAC TGTGGCTCAA CCAGCACGTC
GAGCACGGCA AGAAGCTCGC CGACCTCGTC ATCAAGCAGG CGCAGGCGCG CACGCGCGCC
GGCCAGAAGG TCGAAAAGCG CAAGAGCTCG GGTGTGGCCG TGCTGCCAGG CAAACTGACG
GATTGCGAAT CGACCGAAAT CGGCCGCAAC GAACTGTTCC TCGTCGAGGG CGATTCAGCA
GGCGGTTCCG CGAAGATGGG CCGTGACAAG GAGTACCAGG CCATCCTGCC GTTGCGCGGC
AAGGTGCTGA ACACCTGGGA AACCGAGCGG GATCGTCTCT TCGCGAATAA CGAAGTGCAC
GATATTTCCG TAGCGATCGG CGTCGATCCG CATAACCCGG ACGACACCGT CGATCTGTCC
AATCTGCGCT ACGGCAAGAT CTGTATCTTG TCCGATGCGG ACGTCGACGG TTCGCATATC
CAGGTGCTAT TGCTGACGCT GTTCTTCAAG CACTTCCCGC AACTGATCGA GCGCGGTCAC
GTGCATGTCG CGCGTCCGCC GCTGTTCCGC GTCGATGCGC CCGCGCGCGG CAAGAAGCCG
GCGCAGAAGC TGTACGCGCT CGACGAAGGC GAACTCGAAG CGATTCTCGA CAAGCTGCGC
AAGGACGGCG TGCGCGAATC GCAATGGTCG ATCAGCCGCT TCAAGGGGCT CGGTGAAATG
AGCGCCGAGC AGCTGTGGGA CACGACGATG AACCCGGACA CGCGGCGCCT GTCGCCCGTT
GCCCTCGGCG AACTCGACTT CGACGCGACG GTCACGCGCA TGACGATGCT GATGGGCAAG
GGCGAAGCGG CGTCGCGCCG CAGCTGGCTC GAAGAGAAGG GCAACCAGGT CGAAGCGGAT
ATCTGA
|
|---|
| Protein sequence | MSTKKPNAAY SEASIKVLKG LEPVKQRPGM YTRTENPLHI IQEVIDNASD EALGGYGRQI
TVTLHADHSV SVEDDGRGIP FGMHPEERVP VVEIVFTRLH AGGKFDKAAG GAYTFSGGLH
GVGVSVTNAL STRLDVTVWR DGKVAELSFS HGDVIKPLQV RAATKADKKS GTRVTAWADP
KYFDSPNLPL GELQRLLRSK AVLLPGVEVV LINEKTGERQ SWKYEDGLRG YLMEGMAGSD
LLIPLFEGER YAESSRSNEE TFAEGEGAAW VVAWSEEGPL TRESYVNLIP TPAGGTHEAG
LRDGLFQAVK SFVELHNLQP KGVKLLAEDV FARVSFVLSA KVLDPQFQGQ IKERLNSRDA
VKLVSSFARP ALELWLNQHV EHGKKLADLV IKQAQARTRA GQKVEKRKSS GVAVLPGKLT
DCESTEIGRN ELFLVEGDSA GGSAKMGRDK EYQAILPLRG KVLNTWETER DRLFANNEVH
DISVAIGVDP HNPDDTVDLS NLRYGKICIL SDADVDGSHI QVLLLTLFFK HFPQLIERGH
VHVARPPLFR VDAPARGKKP AQKLYALDEG ELEAILDKLR KDGVRESQWS ISRFKGLGEM
SAEQLWDTTM NPDTRRLSPV ALGELDFDAT VTRMTMLMGK GEAASRRSWL EEKGNQVEAD
I
|
|---|
| |