Gene Bphy_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2109 
Symbol 
ID6243597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2367524 
End bp2368441 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID642593902 
Producthypothetical protein 
Protein accessionYP_001858333 
Protein GI186476863 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.96486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.187601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC TGATCAAGCG CGCTTCCGCC GAGGCGCGTG CTTTCCGCAG CGATCCCACC 
TCAGCCTCCA AGCAGACCAT CTCGCGCGCG AAAACCCGCG CTGCCCGCGA CGAAGATGAT
GTCAGCGTCG CCGCCAGGGC GTCGCTGATC GAAGCGCCGC GCAAGCCGCG TTTCGCGCCT
GTCACGTTCT CGGAAGAGGG CGGCGTGCGC TATCTGCATT TCGGCACGGA ATGGGTGCAA
GGCGCGATGC GTCTGTCGAA GCCCGATCAC ATCGAACTCG AATACGCACA GCAGATGATG
GCATGGCTGC TGTTCCTCGA AACGCCGAAG CGCATCGTGC AACTCGGCCT CGGCACCGGC
TCGCTGACGA AGTTCGCGCA CCGCTTCCTG AAGCGCGCAC AGGTCGAAGC GGTCGAACTG
AATCCCGCCG TGGTGATCGC CGCGCGCACG ATGTTCAGTC TGCCCGCCGA CGACGCACGC
CTCACCGTGC GCGAAACCGA CGCCTGGGAG TTCGTGAACG ACCGCGCGAA TCACGGCACC
GTCGGCGCGT TGCAGATCGA TCTCTACGAT GCGACCGCGC GCGGCCCGGT GCTCGACAGC
GTCGCGTTCT ATCGCGCGGC GCGTGCGTGT CTGACGCAAG CGGGCGTCGT CACCGTCAAC
CTGTTCGGCG ATCATCCCAG CTTCGTGCGA AACATGAAGC GATTGAACGA AGCGTTCGAC
GGACGCGTCG TCGCGCTGCC CGAAGTGCAC GACGGCAATC GCATCGCGAT CGCATTCTCG
GGCCCCGCCA TCGACGTGCC TTTCGCGCGG TTGCTGGAGC GCGCGAAGCT GATCGAGGCG
CAGCTCAAAT TGCCCGCGCG CAAGTGGATC AAGGGCCTGC AGGAATCGAC GGGCCACACG
GGCACGTTCG CGATCTGA
 
Protein sequence
MTKLIKRASA EARAFRSDPT SASKQTISRA KTRAARDEDD VSVAARASLI EAPRKPRFAP 
VTFSEEGGVR YLHFGTEWVQ GAMRLSKPDH IELEYAQQMM AWLLFLETPK RIVQLGLGTG
SLTKFAHRFL KRAQVEAVEL NPAVVIAART MFSLPADDAR LTVRETDAWE FVNDRANHGT
VGALQIDLYD ATARGPVLDS VAFYRAARAC LTQAGVVTVN LFGDHPSFVR NMKRLNEAFD
GRVVALPEVH DGNRIAIAFS GPAIDVPFAR LLERAKLIEA QLKLPARKWI KGLQESTGHT
GTFAI