| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2107 |
|---|
| Symbol | |
|---|
| ID | 6243595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2365374 |
|---|
| End bp | 2366924 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593900 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001858331 |
|---|
| Protein GI | 186476861 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.328511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA CCGCAACCTT CGTCTTCGTT CTGTTCTTCA TCGGCGTCAC GATTCTCGGC
TTCATCGCCG CGCACTGGCG TCGCGGCGAT CTCGCGCATC TGGAAGAGTG GGGCCTCGGC
GGCCGGCGCT TCGGCACGGT CGTCACCTGG TTCCTGCTGG GCGGCGACCT GTACACCGCC
TACACCTTCG TCGCAGTCCC GGCGCTCGTG TTCGGCGCGG GCGCGACCGG CTTCTTCGCA
CTGCCCTATA CGATCCTGAT CTATCCGTTC GCGTTCGTCG TGTTTCCGAA GCTGTGGAGC
ATCGCGAAAC GCCAGGGCTA CGTGACCTCC GCCGACTTCG TCAGCGCACG CTACGGCAGC
CGCATGCTCG CGCTCGCCAT CGCCGTGACG GGTATCGTCG CGACGATGCC GTACATCGCG
TTGCAACTGG TCGGTATCGA AGTGGTGATC GGCGCGCTCG GTTTCGACAC GAAGGGGTTC
GTCGGCGACC TGCCGCTCAT CATCGCGTTC GCGATTCTGG CCGCGTACAC GTACACCTCC
GGTCTGCGCG CGCCCGCCAT GATTGCCGTC GTGAAGGACG TGCTGATCTA CATCACGATC
GCCGCCGCGA TCATCGTGAT TCCGCCGCAA TTGGGCGGCT TCGGCCACAT CTTCGGCGCG
GTTCCGCCCG CCAAGCTGCT GCTCAAGGCA CCGGACGTCG CGAGCCTGAA CGGCTATAGC
GCCTACGCGA CGCTCGCGGT GGGATCGGCG CTCGCGCTGT TCCTGTATCC GCATTCGGTG
ACGGCGATCC TGTCGTCGTC GTCGGGCAAC ACGATCCGCC GCAACATGGC GATGCTGCCC
GCCTACTCGC TGGTGCTCGG TCTGCTCGCG CTGCTCGGCT TCATGGCGCT CGCAGCGGGC
GTGAAGGACA TGCCGGAGTT CGCGCCGTAT TTCAAGGCCT TCGGTCCCAA CTTCGCGGTC
CCGGCGCTGT TTCTGCACTT CTTCCCGTCG TGGTTCGTCG GCGTCGCGTT CGCGGCGATC
GGCATCGGCG CGCTGGTGCC CGCGGCGATC ATGTCGATTG CAGCCGCCAA TCTGTACACG
CGCAACATCC ACAAGGAGTT CGTGAACCGC AACATGACGC ACGAGCAGGA GACGAACATT
GCCAAACTCG TGTCGCTGAT CGTGAAGGTT GGCGCCGTCG CGTTCATTCT CGGTTTGCCG
CTGACATATG CGATCCAGTT GCAGCTGCTC GGCGGCATCT GGATCATCCA GACGCTGCCC
GCAATCGTGC TCGGCCTCTA CACGCGCGTG CTCGACTATC GCGGGCTGCT GCTCGGCTGG
GCGGTGGGCA TCGCCGTCGG CACGTGGATG GCGATCTCGC TGAAACTGGC GGGCTCGATC
TATACGATTC ACATCGGCGG CCTTGCCATT CCGGGTTACG CGGCTGTCTG GTCGCTGATC
GTCAACCTCG TGGTGTCGGT CGTGGCCAGC CTGCTGGTGC GTGCATTCGG CATGAAGCAC
GCCGAAGACC GCACGCGTCC GGAAGACTAC CTGGATGTGC ATGAAGCCTG A
|
|---|
| Protein sequence | MNATATFVFV LFFIGVTILG FIAAHWRRGD LAHLEEWGLG GRRFGTVVTW FLLGGDLYTA
YTFVAVPALV FGAGATGFFA LPYTILIYPF AFVVFPKLWS IAKRQGYVTS ADFVSARYGS
RMLALAIAVT GIVATMPYIA LQLVGIEVVI GALGFDTKGF VGDLPLIIAF AILAAYTYTS
GLRAPAMIAV VKDVLIYITI AAAIIVIPPQ LGGFGHIFGA VPPAKLLLKA PDVASLNGYS
AYATLAVGSA LALFLYPHSV TAILSSSSGN TIRRNMAMLP AYSLVLGLLA LLGFMALAAG
VKDMPEFAPY FKAFGPNFAV PALFLHFFPS WFVGVAFAAI GIGALVPAAI MSIAAANLYT
RNIHKEFVNR NMTHEQETNI AKLVSLIVKV GAVAFILGLP LTYAIQLQLL GGIWIIQTLP
AIVLGLYTRV LDYRGLLLGW AVGIAVGTWM AISLKLAGSI YTIHIGGLAI PGYAAVWSLI
VNLVVSVVAS LLVRAFGMKH AEDRTRPEDY LDVHEA
|
|---|
| |