| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2077 |
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| Symbol | |
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| ID | 6243565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2326942 |
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| End bp | 2328735 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593870 |
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| Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
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| Protein accession | YP_001858301 |
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| Protein GI | 186476831 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0851764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0377374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCCA AGCCAACGTT AAGCAAGCCC ATCGGCTCCG GTGAAGCATC GTCGACCATC
GTGGTCCTGC GGCGTCTGTG GCCGTATGTC AAACCGCTCA TCTGGACCGT CCTGGCCGGC
ATTTTGACGA TGGGCGTCGT TGCCGCCACC GAGGCGGGGA TTCCCGCACT GCTCAAGCCG
CTTCTCGACC ACGGCTTCGG CGCGCACGGC AGCGATAGTG CGAAGTGGTA CGTGCCGCTC
GCCGTGATCG GTCTCGCGTT CGTGCGCGGT GTCGCGCAGT ATGCGTCGGG CTATCTACTG
TCCTATGTAT CAAACCGCAT TCTGCTGCAA CTGCGGCTGA CCATGTTCAA CCGGATGATT
CACAGCAGCG TTGCCTTCTT CCAGCGTGAA ACCGCGAGCA CGGTCATCAA CGCGATCGTC
TTCGAGGTGA ACCAGATCCT GAACACACTG ACGGGCGTGA TGGTCACGCT CGTGCGCGAC
TCGCTGACGG TCGTGTTCCT GCTCGGCTAC CTGTTTTATC TGAACTGGCG CCTGACGCTG
ATCGTCGCGG TGCTGCTGCC GGGCATCGGC TGGCTGGTCG GCAAGATCAA CCGCCGGCTG
CGGCGCCTGA ACCGCGAGCA TCAGAATCTC ACCAACGAAC TGTCGTACAT CGTCGAGGAG
ACGGTAGGCG GCTACAAGGT CGTCAAGGTG CACAACGGCG AGCAGTATGA GATCGACCGT
TTTACGGAGA TGAGCAAACG GCTGCGCGGC TACTCGATGC GCATGACGGT GTCGGGCGGC
CTCGCGCAAC CGCTGACGCA ATTTCTCGCG TCGATCGCGC TCGCTGTCGT GATTACGATC
GCCGTCGTGC AGTCGTCGCA CGATCAGACG ACGGTCGGCG GTTTCGTCGC GTTCGTCACA
TCGATGCTGC TGATCATATC CCCGCTCAAG CATTTGATGG ACGTCAACCA GCCCTTGCAG
CGCGGGATGA CGGCGGCTGA GCTGATCTTC GGGCTCATCG ACGAGCCGTC GGAGCCGCCG
GGCGGCGGCC GCAAGCTGGA ACGGTCGACC GGCGAAGTCG AATTCCGCGA CGTGTCGTTC
ATGTACGGCG CAAGCGGTCC GATGCAGCGG CAGACGCTGG ACACCGTGTC GTTCAAGGTT
GCGCCGGGCG AGATGGTCGC ACTGGCGGGG CCGTCGGGCA GCGGCAAGAC GACGCTCGTG
AATCTGCTGC CCAGATTCTT CGATCCGAGC GGCGGCAAGA TTCTGGTCGA CGGTGTTGCG
CTGCCCGAGT ACGGCATTCA CGAACTGCGC AGCCAGATCG CAATGGTGAG CCAGGACGTC
GTGCTGTTCA ACGACACGAT CGCAAACAAC GTCGCCTACG GGCAGCCGGC GGACCCGGAG
CGCGTGAAAG CGGCGCTGCG TGCGGCCAAT CTGTGGGACA CCGTCGCCGC GATGCCGAAC
GGCATCGACA CGCTTGTCGG CGACAACGGC ATGATGCTGT CGGGCGGTCA GCGTCAGCGT
CTCGCGATTG CGCGCGCAGT CTATAAGGAC GCGCCCATCC TGATTCTCGA CGAAGCCACC
TCGGCGCTTG ATTCCGAATC GGAGCGCCAC GTACAAGCCG CGCTCGAAAC ATTGATGAAG
GGCCGTACGA CGCTTGTGAT CGCGCATCGT TTGTCGACCA TCGAGCGTGC CGACCGCATC
CTCGTGCTCG ACGCGGGACG CATCGTCGAG CGCGGCAGCC ACCGCGAACT GCTGGCACAG
AACGGGCTGT ATGCGCATCT GCATCGCATC CAGTTTCAGC AGCACGCGGC ATGA
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| Protein sequence | MSAKPTLSKP IGSGEASSTI VVLRRLWPYV KPLIWTVLAG ILTMGVVAAT EAGIPALLKP
LLDHGFGAHG SDSAKWYVPL AVIGLAFVRG VAQYASGYLL SYVSNRILLQ LRLTMFNRMI
HSSVAFFQRE TASTVINAIV FEVNQILNTL TGVMVTLVRD SLTVVFLLGY LFYLNWRLTL
IVAVLLPGIG WLVGKINRRL RRLNREHQNL TNELSYIVEE TVGGYKVVKV HNGEQYEIDR
FTEMSKRLRG YSMRMTVSGG LAQPLTQFLA SIALAVVITI AVVQSSHDQT TVGGFVAFVT
SMLLIISPLK HLMDVNQPLQ RGMTAAELIF GLIDEPSEPP GGGRKLERST GEVEFRDVSF
MYGASGPMQR QTLDTVSFKV APGEMVALAG PSGSGKTTLV NLLPRFFDPS GGKILVDGVA
LPEYGIHELR SQIAMVSQDV VLFNDTIANN VAYGQPADPE RVKAALRAAN LWDTVAAMPN
GIDTLVGDNG MMLSGGQRQR LAIARAVYKD APILILDEAT SALDSESERH VQAALETLMK
GRTTLVIAHR LSTIERADRI LVLDAGRIVE RGSHRELLAQ NGLYAHLHRI QFQQHAA
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