| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2022 |
|---|
| Symbol | |
|---|
| ID | 6243511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2273638 |
|---|
| End bp | 2275395 |
|---|
| Gene Length | 1758 bp |
|---|
| Protein Length | 585 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642593816 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_001858247 |
|---|
| Protein GI | 186476777 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.721399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGCG CGGAATTCTC CACGTCGGAT ACCACACCAC ACCACGAAGC CGACTCTATC
GGCGCCACCG TGCTCATGAA GGCACTGGCC GACGAAGAAG TCGAATTCGT CTGGGGCTAT
CCCGGCGGCT CGGTACTCTA CATCTACGAC GAGCTTTACA AGCAGGACAA ATTCCAGCAC
GTCCTCGTGC GCCACGAGCA GGCCGCAGTC CACGCCGCTG ACGCCTACGC ACGCTCGACC
GGCAAGGTCG GCGTCTGCCT CGTGACCTCC GGGCCCGGCG TCACCAATGC CGTGACGGGC
ATCGCGACGG CCTATATGGA TTCGATCCCT ATGGTCGTCA TCAGCGGCCA GGTGCCGACT
GCCGCGATCG GCCAGGATGC GTTCCAGGAG TGCGACACGG TCGGCATCAC GCGTCCCTGC
GTGAAACACA ACTTCCTCGT GAAGGACGTG CGCGATCTTG CCGCCACCGT CAAGAAAGCT
TTCTACATCG CCCGAACCGG CCGTCCCGGC CCGGTGCTGA TCGACATTCC GAAAGACGTG
TCGAAGGCGC CGTGCCAGTA CGAACCGATC AAGAGCGTGT CGCTGCGCTC GTACAACCCG
GTCACGAAGG GCCATTCGGG CCAGATCCGC AAGGCCGTGG CGCTGCTGCT GTCCGCCAGG
CGCCCCTACA TCTATACGGG CGGCGGCATC ATCCTCGCGG ATGCGTCGCG CGAACTGAAC
CAGTTCGCCG ATCTGCTCGG CTATCCCGTC ACGAACACGC TGATGGGACT GGGCGGCTAC
CGCGCGAGCG ACAAGAAATT TCTCGGCATG CTCGGCATGC ACGGCACGTA CGAAGCCAAC
ATGGCGATGC AGCACTGCGA CGTGCTGATC GCGATCGGCG CGCGTTTCGA CGACCGCGTG
ATCGGCGATC CGAGCCACTT CGCATCGCGC CCGCGCAAGA TCATCCACAT CGACATCGAC
CCGTCGTCGA TTTCGAAGCG CGTGAAGGTC GATATCCCGA TCGTCGGCGA CGTGAAGGAA
GTGCTGAAGG AACTGATCGA GCAATTGCAG ACGGCCGAGC ATGGCCCCGA CACGGCGGCG
CTCGCCGACT GGTGGAAGGA CATCGAAGCC TGGCGTGCGA AAGACTGCCT GAAGTTCGAC
CGCGAGAGCG ACATCATCAA GCCGCAATAC GTGGTGGAAA AGGCGTGGGA ACTGACGGAC
GGCAATGCCT TCGTGTGTTC CGACGTCGGT CAGCACCAGA TGTGGGCGGC ACAGTTCTAT
CGCTTCAACA AGCCGCGTCG CTGGATCAAT TCCGGTGGTC TCGGCACGAT GGGCTTCGGC
CTGCCGGCGG CGATGGGCGT GAAGATGGCG CACCCGGACG ACGACGTGCT CTGCATCACG
GGCGAAGGCT CGATCCAGAT GTGCATCCAG GAGCTGTCCA CCTGCAAGCA GTATGAGACG
CCCGTCAAGA TCATCTCGCT CAACAACCGC TATCTGGGCA TGGTGCGCCA GTGGCAGCAG
ATCGAATACA GCAAGCGCTA TTCGCATTCC TACATGGATG CGCTGCCCGA TTTCGTGAAG
CTCGCCGAAG CGTACGGCCA CGTCGGCATG CGGATCGAAA AGACCGCCGA CGTGGAACCG
GCGCTGAAGG AAGCGCTGCG CCTGAAAGAC CGCACGGTGT TTCTCGACTT CCAGACCGAT
CCGACCGAAA ACGTCTGGCC GATGGTTCAG GCCGGCAAGG GCATCACGGA GATGCTCCTC
GGGTCGGAAG ATCTATAA
|
|---|
| Protein sequence | MPSAEFSTSD TTPHHEADSI GATVLMKALA DEEVEFVWGY PGGSVLYIYD ELYKQDKFQH
VLVRHEQAAV HAADAYARST GKVGVCLVTS GPGVTNAVTG IATAYMDSIP MVVISGQVPT
AAIGQDAFQE CDTVGITRPC VKHNFLVKDV RDLAATVKKA FYIARTGRPG PVLIDIPKDV
SKAPCQYEPI KSVSLRSYNP VTKGHSGQIR KAVALLLSAR RPYIYTGGGI ILADASRELN
QFADLLGYPV TNTLMGLGGY RASDKKFLGM LGMHGTYEAN MAMQHCDVLI AIGARFDDRV
IGDPSHFASR PRKIIHIDID PSSISKRVKV DIPIVGDVKE VLKELIEQLQ TAEHGPDTAA
LADWWKDIEA WRAKDCLKFD RESDIIKPQY VVEKAWELTD GNAFVCSDVG QHQMWAAQFY
RFNKPRRWIN SGGLGTMGFG LPAAMGVKMA HPDDDVLCIT GEGSIQMCIQ ELSTCKQYET
PVKIISLNNR YLGMVRQWQQ IEYSKRYSHS YMDALPDFVK LAEAYGHVGM RIEKTADVEP
ALKEALRLKD RTVFLDFQTD PTENVWPMVQ AGKGITEMLL GSEDL
|
|---|
| |