| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1997 |
|---|
| Symbol | |
|---|
| ID | 6243486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2246807 |
|---|
| End bp | 2248300 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642593790 |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_001858222 |
|---|
| Protein GI | 186476752 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.425538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.176809 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACACGA CGTTTCCGAT TCTGAGTATC GCGATCTGGA TGCCGATTAT TTTCGGCCTG
GTGGTCCTGG CCATCGGTTC AGATCGCAAT CCCGGTCCGG CGCGATGGAT TGCGCTGATC
GGGTCGGTGT TGAGTTTCAT CGTGACGATT CCGCTGATCA CGGATTTCGA CACGAGTACG
GCGGCATTGC AGTTCGAAGA AAAGGCTAAC TGGATCGAGC GCTTCAACAT CACGTACCAC
CTCGGCATCG ACGGTATCGC GATGTGGTTC GTCGTGCTGA CGGCGCTGAT CACGGTGATC
GTCGTGATCG CCGCATGGGA AGTGATCACG AAGAACGTCG CGCAATACCT GGCGGCGTTC
CTCATCCTGT CGGGCATCAT GGTCGGCGTG TTCTGCGCAG CTGACGGCAT GCTGTTCTAC
GTGTTCTTCG AAGCGACGCT GATTCCGATG TACATCATCA TCGGCGTGTG GGGCGGGGCG
AACCGCGTGT ACGCGGCGTT CAAGTTCTTC CTCTATACGC TGATGGGTTC GCTGCTGATG
CTGGTGGGCT TGCTGTATCT GTACACGCAG ACGGGCACGT TCGACCTGGC CGCATGGCAC
GCCGCAAAGT TGTCGATGAC GCCGCAGGTG CTGCTCTTCA TCGCGTTCTT CCTCGCGTTC
GCCGTCAAGG TGCCGATGTG GCCTGTCCAC ACGTGGCTGC CGGACGCGCA CGTGGAAGCG
CCGACGGGCG GCTCGGTCGT GCTGGCGGCC ATCATGCTGA AGCTCGGTGC GTACGGTTTC
CTGCGTTTCT CGCTGCCTAT CGCACCGGAC GCAAGTCACT TCCTCGCACC CGTCGTCATT
ACGCTGTCGC TGATCGCGGT GGTCTACATC GGCCTCGTCG CGATGGTGCA GGCCGACATG
AAGAAGCTGG TTGCGTATTC GTCGATTGCG CACATGGGCT TCGTCACGCT CGGCTTCTTT
ATCTTCAACC AGCTGGGCAC GGAAGGCGCG ATCGTGCAGA TGATCTCGCA CGGTTTCGTG
TCGGGCGCGA TGTTCCTTTG CATCGGCGTG CTGTATGACC GCATGCACTC GCGTCAGATC
GCCGACTACG GCGGCGTCGT GAACACGATG CCGAAGTTCG CGGCGCTCGT GATGCTGTTC
TCGATGGCGA ACTGCGGCCT ACCGGGCACC TCCGGTTTCG TCGGCGAGTT CATGGTGATT
CTGGCCGCTG TCCAGTACAA CTTCTGGATC GCGTTCGGCG CGGCCGTGAC GCTGATTCTC
GGCGCGGCCT ATACGTTGTG GATGTACAAG CGCGTGTACT TCGGCGCGGT TGTGAACGAT
CACGTGAAAA GCCTCATCGA CATCAACCGC CGCGAATTCT TCATGCTGGG GGTGCTCGCG
GTGTTGACGC TGTACATGGG CATCTATCCG AAGCCCTTTA CCGAAGTAAT GCACGTGTCG
GTGGAAAATC TCCTGTCCCA CGTTGCGCAG TCGAAGCTGC CGCTACCGCA GTAA
|
|---|
| Protein sequence | MHTTFPILSI AIWMPIIFGL VVLAIGSDRN PGPARWIALI GSVLSFIVTI PLITDFDTST
AALQFEEKAN WIERFNITYH LGIDGIAMWF VVLTALITVI VVIAAWEVIT KNVAQYLAAF
LILSGIMVGV FCAADGMLFY VFFEATLIPM YIIIGVWGGA NRVYAAFKFF LYTLMGSLLM
LVGLLYLYTQ TGTFDLAAWH AAKLSMTPQV LLFIAFFLAF AVKVPMWPVH TWLPDAHVEA
PTGGSVVLAA IMLKLGAYGF LRFSLPIAPD ASHFLAPVVI TLSLIAVVYI GLVAMVQADM
KKLVAYSSIA HMGFVTLGFF IFNQLGTEGA IVQMISHGFV SGAMFLCIGV LYDRMHSRQI
ADYGGVVNTM PKFAALVMLF SMANCGLPGT SGFVGEFMVI LAAVQYNFWI AFGAAVTLIL
GAAYTLWMYK RVYFGAVVND HVKSLIDINR REFFMLGVLA VLTLYMGIYP KPFTEVMHVS
VENLLSHVAQ SKLPLPQ
|
|---|
| |