| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1996 |
|---|
| Symbol | |
|---|
| ID | 6243485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2245303 |
|---|
| End bp | 2246781 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642593789 |
|---|
| Product | NADH dehydrogenase subunit N |
|---|
| Protein accession | YP_001858221 |
|---|
| Protein GI | 186476751 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0638246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0907291 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG CACCTATGAC CGCCTTGTTA CCCGACGCGC TGGTGATGGC CGCTATCGTC
GTCGCGTGGC TCATCGACAC GTTCGTTGGC CCGAACAGCC GCCGCACGAC GTATTTCATC
GCGCTGCTTT CCACGGTCGT GGCCGGCATC TGGTTCGCCA TCGATGCCCT CACGCCGGGC
GCCGGGCCGC AATACTTCTT CTCGCGCATG TACGTGGTGG ACCCGTTCGC CAGCGTGATG
AAGGCGGTCG TGTCGCTGGG CTACGCGGTG TCGATCGTGT ACTCGCGCAA GTATCTGGAA
GACCGCGGCC TCTACGAAGG CAACTTCTTC CTGCTCGGCA TGTTCTCGCT GCTCGGCCAG
CTGGTGATGA TCTCGGGCAA CAACTTCCTG ACGCTGTATC TCGGCCTGGA ACTGATGTCG
CTGTCGCTCT ATGCGGCAAT TGCGCTTCGT CGCGAGAACG CGCCGTCGAC CGAAGCCGCG
ATGAAGTACT ACGTGCTGGG CGCGCTGGCT TCGGGCTTCC TGCTGTACGG CATCTCGATG
CTGTACGGCG CGACGGGCTC GCTGGAACTG AACGAAGTGC TGAAGGCCGT CGCATCGGGC
CGCATCAACG ACGTCGTGCT GCTGTTCGGC GTGATCTTCA TCGTCGCGGG TGTCGCGTTC
AAGATGGGTG CAGTGCCCTT CCACATGTGG GTACCGGACG TGTATCAGGG CGCGCCGACT
GCAATGACGC TGATCGTCGG CGGCGGTCCA AAGGTCGCTG CGTTCGCATG GGGGCTGCGC
TTCCTGGTGA TGGGCCTGCT GCCGCTCGCC GTCGACTGGC AGGAAATGCT GGTCATTCTG
GCTGCGCTGT CGCTGATCGT CGGCAATATC ACGGGGATCG TCCAGCGCAA CGTCAAGCGG
ATGCTGGCGT ACTCGGCCAT CTCGAACATG GGCTTCGTGC TGCTCGGGCT GCTGGCCGGC
GTGGTCGACG GCAAGACGGG CGCGGCTGCG AGCGCCTACG GTTCCGCGAT GTTCTACAGC
ATCGTCTATC TGATCACCAC GCTCGGCTCG TTCGGCGTCG TGATGCTGCT CGCGCGCCGC
GAATTCGAAG CCGAAACGCT CGACGACTTC AAGGGTCTCA ATCAGCGTAG TCCGGTGTTC
GCGTTCGTGA TGATGGTGAT GATGTTCTCG CTCGCAGGCA TTCCGCCGGC AGTCGGTTTC
TACGCGAAGC TGGCCGTCCT CGAAGCGACG ATGAACGCGG GTCTCACGTG GCTCGCCGTG
CTGGCTGTGA TCACGTCGCT GTTTGGCGCG TTCTATTACC TGCGTATCGT CAAGTTGATG
TACTTCGACG ATCCCGTCGA CACGACGCCG ATCGTCGGCG ACGCCTGCAA GCGCACGCTG
CTCGCACTCA ATGGTGTGGC CGTGCTCGTG CTCGGTATCG TTCCGGGTCC ACTGATGTCG
ATCTGCCTCA ACGCGATTTC CCATACGCTG CCGCTGTAA
|
|---|
| Protein sequence | MQNAPMTALL PDALVMAAIV VAWLIDTFVG PNSRRTTYFI ALLSTVVAGI WFAIDALTPG
AGPQYFFSRM YVVDPFASVM KAVVSLGYAV SIVYSRKYLE DRGLYEGNFF LLGMFSLLGQ
LVMISGNNFL TLYLGLELMS LSLYAAIALR RENAPSTEAA MKYYVLGALA SGFLLYGISM
LYGATGSLEL NEVLKAVASG RINDVVLLFG VIFIVAGVAF KMGAVPFHMW VPDVYQGAPT
AMTLIVGGGP KVAAFAWGLR FLVMGLLPLA VDWQEMLVIL AALSLIVGNI TGIVQRNVKR
MLAYSAISNM GFVLLGLLAG VVDGKTGAAA SAYGSAMFYS IVYLITTLGS FGVVMLLARR
EFEAETLDDF KGLNQRSPVF AFVMMVMMFS LAGIPPAVGF YAKLAVLEAT MNAGLTWLAV
LAVITSLFGA FYYLRIVKLM YFDDPVDTTP IVGDACKRTL LALNGVAVLV LGIVPGPLMS
ICLNAISHTL PL
|
|---|
| |