Gene Bphy_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1983 
Symbol 
ID6243472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2233897 
End bp2235477 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content65% 
IMG OID642593776 
Product3-hydroxy-acyl-CoA dehydrogenase 
Protein accessionYP_001858208 
Protein GI186476738 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCGT ACACCTCTCG CCAGTACAGC ATCGAGACTG TCGGCATCGT CGGCACGGGT 
GCGATGGGAC GCGGCATCGC CCAGATCGCC GCGCTCGCGG GCCTCCAGGT CAGGCTCTAC
GACACGAACG CCGCAGCGGT CGGCGCGGCG CGCGACTATC TGTCCGACAC CTTCTCGAAG
CTCGTTCCCA AAGGCAAGCT AGACAGTTCG CGTTCGCTCG CGGCGCTTGC CTGCGTGACG
GGCGCCAACG CCATCGAAGA ACTGAAGGAC TGCGATCTCG TCGTCGAAGC AATCGTCGAA
AAGCTCGACG TGAAGCGCGC GCTCTTCAAG GAGCTGGAAG GCATCGTCAG CGAACGTTGC
ATACTCGCGT CGAACACGTC GTCGCTGTCG ATCACGGCAA TTGCTGCCGC ATGCACGGAC
CCGTCGCGTG TGCTCGGCTA TCACTTCTTC AATCCGGTGC CGCTGATGAA GGTCGTCGAA
GTGATCGACG GTTTGCGCAG CGATCCCGCC GCCGGCAACG CGCTGATGGA TCTCGCACGC
CGCATGGGCC ATACGCCCGT GCGCGCGAAA GACATGCCTG GCTTCATCGT GAATCACGCG
GGCCGCGGCA TGAACACGGA AGGCCTGCGA GTAGCGGATG AAGGTGTTGC GAGTTTCGTC
GACATCGACC GCATCATGCG CGAGCAGGCG GGCTTCCGGC TCGGACCGTT CGAGCTGCTC
GACCTGACCG CGCTCGACGT GTCGCATCCC GTGATGGAAT CGATCTATCA CCAGTTCTAC
GAAGAGGCGC GCTTCACGCC GTCGCCGATC ACAGGCACGC GCCTCGCGGG CGGCCTGATC
GGACGCAAGG CGGGAGAAGG CTTCTATGTC TACGTCGATG GCAAGCAGCA GGCGCCCGCC
GAAGCCCCGG CACCAACTGA ACTGCCGAAG CGCGTGTGGG TCAGCGCGCG TGGGCCCGCT
GCACGCGATG CCGTAGTCGC GCTGATTGCA AGGGCCGGCG TCGCCGTCGA CCAAGGTGCG
ACGCCCGGCG CCGATTCGCT GATCGTCGTG ACGCCGCTGG GTTTCGATGC AACGACAGCC
GCCGTCGATG AAGGTCTCGA TGCGAGCCGC GTCGTCGCCA TCGACACGCT CTTCCCGCTC
GTCGAAGCAC AACGCCGCAC GTTGATGACA ACGCCCGCGA CGACGCGCGC CGCGCGTGAT
ACCGCGCACG CCCTGTTCGC ACACGACGGC GTACCCGTCA CCGTGATCCG CGATTCGACG
GGCTTCGTGG CGCAGCGTGT CGTCGCGACG ATCGTCAACA TTGGTTGCGA TATTGCGCAG
CGGCAGATCG CGTCGCCGGA AGACATCGAT CTCGCCGTCA CGCTCGGCCT CGGTTATCCA
CGCGGACCGC TGGCACTCGG CGATGCGCTC GGCGCGCAGA CCATCCTGAC GATTCTGCGC
AACATGTTCA AGGTGCTCGG CGATCCGCGC TATCGTCCTT CACCGTGGCT CGCACGCCGC
GCGCAACTCG GTATGCCGCT CACGCAACGC GATGCCACCG ACAATGACGA CAACAACTAC
GACACTCAGG AGCACGCATA A
 
Protein sequence
MSPYTSRQYS IETVGIVGTG AMGRGIAQIA ALAGLQVRLY DTNAAAVGAA RDYLSDTFSK 
LVPKGKLDSS RSLAALACVT GANAIEELKD CDLVVEAIVE KLDVKRALFK ELEGIVSERC
ILASNTSSLS ITAIAAACTD PSRVLGYHFF NPVPLMKVVE VIDGLRSDPA AGNALMDLAR
RMGHTPVRAK DMPGFIVNHA GRGMNTEGLR VADEGVASFV DIDRIMREQA GFRLGPFELL
DLTALDVSHP VMESIYHQFY EEARFTPSPI TGTRLAGGLI GRKAGEGFYV YVDGKQQAPA
EAPAPTELPK RVWVSARGPA ARDAVVALIA RAGVAVDQGA TPGADSLIVV TPLGFDATTA
AVDEGLDASR VVAIDTLFPL VEAQRRTLMT TPATTRAARD TAHALFAHDG VPVTVIRDST
GFVAQRVVAT IVNIGCDIAQ RQIASPEDID LAVTLGLGYP RGPLALGDAL GAQTILTILR
NMFKVLGDPR YRPSPWLARR AQLGMPLTQR DATDNDDNNY DTQEHA