Gene Bphy_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1963 
Symbol 
ID6243452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2207623 
End bp2208468 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content61% 
IMG OID642593751 
Producthypothetical protein 
Protein accessionYP_001858188 
Protein GI186476718 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0614068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTT ACCGCCACGC TTTTCACGCA GGCAATCACG CCGACGTCCT GAAACACGCC 
GTCGTTGTGC AGTTGCTGCG CTACCTTGGA CAAAAGGACA AGGCGTACTG GTACATCGAC
ACGCACGCGG GTGCCGGCGT CTACTCGCTC AAGGAAGGCT ACGCGACCAA GACCGCGGAG
TTCGAGACGG GCATTGCGAG ATTGTGGGAG CGCAAGGACT TGCCGCCCAT GCTGGCCGAG
TACGTCGACG AAGTATCGGC GCTGAATCCC GATGGCGAGT TGCGCTACTA CCCCGGATCG
CCTTATCTCG CATGGCGCTT GATGCGCGAG CAGGACCGTA TGCGCCTGTT CGAATTGCAC
AGCACCGAGA TCGACGTGCT GCGCCACAAC TTTCGCGACG CGGGGCGCCG CGCGATGCTC
TTCGCAGGCG ATGGCTTCGA CGGCATCAAG GCGCTTTTGC CGCCCGCGCC GCGCCGCGCG
CTCGTGCTCG TCGATCCATC CTATGAAGAC AAACGCGATT ACTCGCGAAC CCTGACTTGC
GTCGAAGAAA GTCTGAAGCG TTTTGCGACA GGAACGTATG CCGTCTGGTA TCCGCAAGTC
GCGCGACCGG AGTCCCAGCG CTTTCCCGAG CAGTTGAAGC GGCTGCAGGA CAGGAACTGG
CTGCATGTGT CGTTGACAGT TAGCAGCCCA CCTAGCGATG GCTTTGGACT CTTCGGCAGC
GGCATGTTCA TTCTGAACCC GCCCTACACG CTGCCGAAGA TGTTGAAAGA AACGCTGCCG
TGGCTCGTCG AGACACTCGG CGAGGACAAG GCCGCGCAGT TCAAGATCGA ACATCGCGGC
GACTGA
 
Protein sequence
MLSYRHAFHA GNHADVLKHA VVVQLLRYLG QKDKAYWYID THAGAGVYSL KEGYATKTAE 
FETGIARLWE RKDLPPMLAE YVDEVSALNP DGELRYYPGS PYLAWRLMRE QDRMRLFELH
STEIDVLRHN FRDAGRRAML FAGDGFDGIK ALLPPAPRRA LVLVDPSYED KRDYSRTLTC
VEESLKRFAT GTYAVWYPQV ARPESQRFPE QLKRLQDRNW LHVSLTVSSP PSDGFGLFGS
GMFILNPPYT LPKMLKETLP WLVETLGEDK AAQFKIEHRG D