Gene Bphy_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1946 
Symbol 
ID6243435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2190984 
End bp2191715 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID642593734 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001858171 
Protein GI186476701 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.979192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATT ACGGTATCGC CCACGTCTGG GCTCAAGGGG ATTTCGTCAC ACGCGGTATC 
GCGCTGGCGC TGCTGATCAT GTCGGTGCTG TCGTGGAGCG TGATCGTCGT CAAGAGCTGG
AACGTGATGC GCCTGAACCG TCTGACCCGG AACGCCGAAA AGGCCTTCTG GCATTCGGAT
GACTTCGCCG ACGGCGCGAA GAAGCTCGGC AGCGACACGT CGTCGCCCAC TGAAAACCCG
TTCCTCGCGC TCGCGCTGTC GGGCCAGGAA GCCGCGGATC ACCATCATCA GACTCAGCCG
CATCTGCACG ACCGCATGGA CGTGTCGGAC TGGGTCACGC GCTGCCTGAA GGACACGATG
GATGAAAGCG TTGCGCGCAT GCAGGCCGGC CTCGCAATTC TCGCGTCGAT CGGCAGCACG
GCGCCGTTCG TCGGCCTGTT CGGCACGGTG TGGGGCATCT ATCACGCGCT GTTGACGATC
GGCGCGACTG GCCAGTCGTC GATTGATCAG GTTGCCGGTC CCGTCGGCGA AGCGCTCATC
ATGACGGCCT TCGGTCTGTT CGTCGCGATC CCCGCCGTGC TCGGCTACAA CGCGCTGACG
CGCGCCAACA AAGGCATCGT CAGCAAGCTG AACCGGTTTG CCCACGGTCT GCATGCGTTC
TTCGTCACGG GCGCGCGCCT GTCGTCGTCG AAACGCGGCG ACGGTCTTCG GCTCGCGACC
CGCACCAACT AA
 
Protein sequence
MQNYGIAHVW AQGDFVTRGI ALALLIMSVL SWSVIVVKSW NVMRLNRLTR NAEKAFWHSD 
DFADGAKKLG SDTSSPTENP FLALALSGQE AADHHHQTQP HLHDRMDVSD WVTRCLKDTM
DESVARMQAG LAILASIGST APFVGLFGTV WGIYHALLTI GATGQSSIDQ VAGPVGEALI
MTAFGLFVAI PAVLGYNALT RANKGIVSKL NRFAHGLHAF FVTGARLSSS KRGDGLRLAT
RTN