| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1938 |
|---|
| Symbol | |
|---|
| ID | 6243427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2182091 |
|---|
| End bp | 2184073 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593726 |
|---|
| Product | acetyl-CoA synthetase |
|---|
| Protein accession | YP_001858163 |
|---|
| Protein GI | 186476693 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGA TTGAATCGGT TCTTCAAGAA CGCCGCGTGT TTCAGCCTTC GGCCGAAGTG
GCGGCACAGG CGACTGTGTC CGGCATGGAC GCATACAAGG CGCTCGTCGC CGAGGCGGAG
CGCGATTACG AAGGCTTCTG GGGCAGGCTG GCGCGCGAGA CGCTCAGCTG GAACAAGCCT
TTCACGAAGG TGCTCGACGA ATCGAACGCA CCTTTCTACA AGTGGTACGA CGATGGCGAG
CTGAACGCGT CGTACAACAG CATCGACCGG CATGTCGAAG CGGGTAACGG CGAGCGCGTC
GCGATCATCT TCGAAGCCGA CGACGGCACC ATCACCAACG TCACATACAA CGACCTGCTG
CAACGGGTGT CACGCTTCGC GAATGCGCTG AAGCAACGTG GCATCAAGAA GGGCGATCGC
GTCGTCATCT ATATGCCGAT GTCGGTCGAA GGCATTGTCG CGATGCAGGC GTGCGCGCGG
ATCGGCGCAA CGCACTCGGT GGTGTTCGGC GGCTTTTCTT CGAAGTCGCT GAACGAGCGT
CTGGTCGACG TGGGCGCGGT TGCGCTGGTC ACGTCGGACG AACAGATGCG CGGCGGCAAG
GCACTGCCGC TGAAGAACAT CGCCGACGAA GCGCTCGCGA TGGGCGGCTG CGAGGCCGTG
AAAAGCGTGA TCGTCTATCA GCGCACGGGC GGCAAGATCG GCTGGGACGA CAAGCGCGAC
CTGTGGATGC ACGAGATCAC TGCGAGCGAG TCGGATCACT GCCCGCCCGA GTGGGTCGGC
GCCGAGCATC CGCTCTTCAT CCTCTACACG TCGGGGTCGA CGGGCAAACC GAAAGGCGTG
CAGCACAGCA CGGGCGGCTA TCTGTTGTGG GCCGCCCAGA CGATGAAGTG GACCTTCGAC
TGGAAGCCGA CGGATGTCTT CTGGTGCACG GCCGACATCG GCTGGGTCAC GGGCCACAGC
TACATCACGT ATGGTCCGCT CACGCTGGGT GGCACACAGG TCGTGTTCGA AGGCGTGCCG
ACCTATCCGA ACGCGGGGCG CTTCTGGGAC ATGATCCAGA AGCACAAGGT CACCGTGTTC
TACACCGCGC CGACGGCGAT CCGCTCGCTC ATCAAGGCCG CGGAGGCCGA CCCGAAAGTG
CATCCGAAGA GCTACGACCT GTCCACCTTG CGCATCATCG GCACGGTCGG CGAGCCGATC
AATCCGGAAG CGTGGGTGTG GTACTACGAA AACGTGGGCG GCTCGCGCTG CCCGATCGTC
GATACGTGGT GGCAGACGGA AACGGGCGGC CACATGATCA CGCCGCTGCC GGGCGCGACG
CCGCTCGTCC CGGGTTCGTG CACGCTGCCG CTGCCGGGCA TCATGGCGGC AGTGGTCGAT
GAGACCGGTC AGGACGTGCC GAACGGGCAG GGCGGCATTC TCGTCGTCAA GCGTCCGTGG
CCATCGATGA TCCGCACGAT CTGGGGCGAC CCCGAGCGTT ACAAGAAGAG CTACTTCCCG
GAAGAACTGG GCGGCACGCT GTATCTCGCA GGCGACGGCT CGGTGCGCGA CAAGGAGACC
GGCTACTTCA CGATCATGGG CCGTATCGAC GACGTGCTGA ACGTGTCGGG CCACCGTCTC
GGCACGATGG AGATCGAGTC GGCGCTGGTC GCGAATCCGC TCGTCGCGGA AGCCGCCGTG
GTAGGCCGTC CCGACGACAC CACGGGCGAA GCCGTGTGCG CGTTCGTGGT GCTCAAGCGC
GCGCGTCCCG AAGGCGAAGA GGCCGCGAAG ATCGCGGCCG ATCTGCGCAA CTGGGTCGGC
AAGGAAATCG GCCCGATCGC GAAGCCGAAG GACATCCGTT TCGGCGACAA CCTGCCAAAG
ACGCGTTCGG GCAAGATCAT GCGCCGTCTG CTGCGCTCGC TCGCGAAGGG CGAGGAGATC
ACGCAGGACG TCTCGACGCT CGAGAATCCG GCGATTCTCG ATCAACTGGG CGAGTCGCGC
TGA
|
|---|
| Protein sequence | MSAIESVLQE RRVFQPSAEV AAQATVSGMD AYKALVAEAE RDYEGFWGRL ARETLSWNKP
FTKVLDESNA PFYKWYDDGE LNASYNSIDR HVEAGNGERV AIIFEADDGT ITNVTYNDLL
QRVSRFANAL KQRGIKKGDR VVIYMPMSVE GIVAMQACAR IGATHSVVFG GFSSKSLNER
LVDVGAVALV TSDEQMRGGK ALPLKNIADE ALAMGGCEAV KSVIVYQRTG GKIGWDDKRD
LWMHEITASE SDHCPPEWVG AEHPLFILYT SGSTGKPKGV QHSTGGYLLW AAQTMKWTFD
WKPTDVFWCT ADIGWVTGHS YITYGPLTLG GTQVVFEGVP TYPNAGRFWD MIQKHKVTVF
YTAPTAIRSL IKAAEADPKV HPKSYDLSTL RIIGTVGEPI NPEAWVWYYE NVGGSRCPIV
DTWWQTETGG HMITPLPGAT PLVPGSCTLP LPGIMAAVVD ETGQDVPNGQ GGILVVKRPW
PSMIRTIWGD PERYKKSYFP EELGGTLYLA GDGSVRDKET GYFTIMGRID DVLNVSGHRL
GTMEIESALV ANPLVAEAAV VGRPDDTTGE AVCAFVVLKR ARPEGEEAAK IAADLRNWVG
KEIGPIAKPK DIRFGDNLPK TRSGKIMRRL LRSLAKGEEI TQDVSTLENP AILDQLGESR
|
|---|
| |