| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1887 |
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| Symbol | |
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| ID | 6243376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2144218 |
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| End bp | 2145888 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642593675 |
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| Product | lambda family phage portal protein |
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| Protein accession | YP_001858112 |
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| Protein GI | 186476642 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000167275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACTCA TCGTCGATTC CACCGGCAAG CCGTTCGCGG ATCTGCCGGC AGGGGGGCGT
GCGCGCGCAG ATTCTGGATG GGGCGGCCCG GGCATCACGC AGCCGTCATA TTCGAGCCTC
TTCCCGTACG AGGCCTCGAA CATCCAGACG CCCGAGATGG GCCAGTGGTT TCCTTACATC
CGCTCGCCGG ATTCGGAAAT CAACCAGTTC CGCGATCGCA TGGTCGCGCG TTCGCGCGAT
CTCGCGCGCA ACGACGGCTG GGCTAGCGGT GGCATCACCC GCATTCTGGA CAACACTGTC
GGCGCGCATC TGCGTCTGTC GGCAAACCCG GATTACCGAT CGCTCTCGAT GCGCGCGCGC
GGATTCGATG CAACGTGGGC AGACGAGTTC CGACGTGCTG TCGAAGCGCT CTGGCGCAAC
TACTCGGAGG ACATCGAGCA CTTCAACGAT GTCTCCCGCC AGTTGACGAT GTCGCAGCAG
CTGCGGCTTG CGCTCCGGCA TAAGCTGATC GACGGCGAAA GTCTGTTCGT CAGCTACTGG
ATGCCGGAGC GGATCGGCGT GGGAGGTGCT CGCTACGCTA CGAGCTTCAT GCTGATCGAT
CCGGACCGCC TGTCGAATCC GTACCAGATT GTCGACACGA AATATCTGCG CGGCGGCGTT
GAGATAGACG ATTACGGTGT TCCGCTCGCG TATCACATCC GCAGGGCGCA CCAGAACGAT
TGGTACAACG CTGTGGAGTC AATGGAGTGG GAGCGAGTCC CGCGCGTCGA CGAAGACGGC
TGGCGTCGCG TAGTGCACGA CTTCGAGCGC GATCGCGCGG GGCAGAACCG CGGCATTGGT
GTTTTCACGC CGGTGCTGGC GCACGCGAAG ATGCTCGCCC GGTACTACGG CGTCGAGCTG
CAGGCCGCGA CCGTCGCGAC GATTTTCGGG ACATACGTGA CGAGCCCCTT CGATCCGAAG
ATGATCGAGT CGGCGATGGA CAGCGATGGC GAAGAACTTG GGTTCTATCA GGACCTTCGC
GCCGACTGGT CGAAAGAGCG TCCCGCGATG CTCAACAGTG TTCGCATCCC AACGTTGGCG
CCAGGCGAAG ACATCAAGCA GGTCAACGCC GCGCATCCGC ACAGTGGATT CGGCGAATTC
GCGCATGAGA TGCTCCGCTC GATCGCGGCC GCGCTTGGCG TATCCGCTGA GCAAATCACG
CAGGATTGGA GCAGGACGAA CTATTCCAGC GCTCGAGCTG CGATGCTCGA AAGCTGGAAG
ACGCTGTCTC GTCGAAGCGC TGACTTCAAG GTCGGCACCG CAACGCCGAT CTACGCGTGC
TGGCTTCGGG AGGCGATGGA AAACGGGGAT CTCGACGATG TCCTGCCGCG CAATGCGCCC
GACTACATCG AAGCAGCAAC CGAATACTCG CGCTGTGACT GGCTTGGCGT TGGACGGGGA
TATGTCGACG TTACAAAGGA GGCGGCCGGA GCAGTAATGC GCATGGATGG CGGCCTGTCG
ACGCTCCGCG ACGAAGCGAA GGAGCAGGGC CGAGATTGGG AGGAAGTCCT TCATCAGCGC
GCACTGGAAG TCAAGATGTT CAAGGAGCTT GGTCTCAATC CGCCCGACTG GGCTGGTGAG
GTTGCCGCCG CCGAGGTGGG CAAGCCAGAG CCAACACCGC AACCGCAATA G
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| Protein sequence | MTLIVDSTGK PFADLPAGGR ARADSGWGGP GITQPSYSSL FPYEASNIQT PEMGQWFPYI
RSPDSEINQF RDRMVARSRD LARNDGWASG GITRILDNTV GAHLRLSANP DYRSLSMRAR
GFDATWADEF RRAVEALWRN YSEDIEHFND VSRQLTMSQQ LRLALRHKLI DGESLFVSYW
MPERIGVGGA RYATSFMLID PDRLSNPYQI VDTKYLRGGV EIDDYGVPLA YHIRRAHQND
WYNAVESMEW ERVPRVDEDG WRRVVHDFER DRAGQNRGIG VFTPVLAHAK MLARYYGVEL
QAATVATIFG TYVTSPFDPK MIESAMDSDG EELGFYQDLR ADWSKERPAM LNSVRIPTLA
PGEDIKQVNA AHPHSGFGEF AHEMLRSIAA ALGVSAEQIT QDWSRTNYSS ARAAMLESWK
TLSRRSADFK VGTATPIYAC WLREAMENGD LDDVLPRNAP DYIEAATEYS RCDWLGVGRG
YVDVTKEAAG AVMRMDGGLS TLRDEAKEQG RDWEEVLHQR ALEVKMFKEL GLNPPDWAGE
VAAAEVGKPE PTPQPQ
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