Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1875 |
Symbol | |
ID | 6243364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2134842 |
End bp | 2136644 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642593663 |
Product | putative membrane protein, phage K related |
Protein accession | YP_001858100 |
Protein GI | 186476630 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.855752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000000791061 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAGCGA GCACGCCATT CGTTGTGACG ATCACCGCGG TCGACAAGGC TACGGCATCC GTCCAGAAGA TCAAGGCGTC GCTTGCGAGC GTCACGAAGC CCGCTTCGGA CCTGAAAGCG TCGTTCGCGA GCTTCAGCAA GGAAGCGGGC CTCGATCGCG TCGCGAAGTC GATGAAGTCC GTTGGCACGG CTGCCGCCGA TACCGCGCGA CAGGTCGCGT CCGTCATTAC GCCGCTGACG ACGATCGCAG GCATCGGATC GATTGCCGGC ATAGCGCTGC TCGCGAACGA ATGGGGCAAG TTCGGCGCCG AGGTGCAGCG TACGTCGGGC GTGCTCGGCG TGTCGACTCA GGATCTACAG GCGTTTCGCG GCGCTGCGAA GCTCGCCGGT CTCTCGGCCG ATGACATGAC CGGAAGCCTG AAGTCGCTCG GTCGCACGAT CGAGGACGCC ACATACGGGC GAAATCAGGA CGCGCTCGTC ATGATGCAGA AGTTCGGCAT CACGCTGCAT CGCACGAAGG ATGGCGCCGT CGACGCGACG CGCGCACTGA AAGAGGTGGC GAACGCCATC GTCGCCCAGA AAGGCAACGT GCAGGCTCAA GGCCTCATTG CCGGAGCGTT TGGTGTGGAA TCTCTGCTTC CTTTGCTGCA AAAAGGGGAG AAGGGTATCG ACGAGTTCGT CAATCGCGCG CGGTCGATGG GCCTTGTGTT CGATGACAAG CAACTCGCGC GCGGTCAGCA GTTCAACGAG AACATGCTCA AGCTCGAAGC GTCGGCCACG CGGTTGAAGT ACTCGTTCGG TGATGCGCTT GCGCCCGCGG TGCAGCGCGT ACTCGACGTT GTTGGACGCC TCGTCGATAA ATATGGCGAC GTGGTCGCCT CGAAGGTGTC CGAGTACGTC GAGAAGTTCG CGAACTGGAT CGATCACGTC GACTGGGACA AGACCACGAG CGAGATCGGA AAATTCGTCG ATGCCATTGG CGGCGTGAAG GGGATTGCTA TCGCGATCGC CGCGATTTCG TTCGCGGGCC CGATCGCAAG TGTGCTCAGC CTGATCTCGA ATCTGACGCT GCTCGCAACT ACGACGGTGC CGACGGCCGT GGCGGCGCTT GCGCGGCTCG CAGGCGGCCC GATCATGGCA GCTGTTCTCG CTCTGCTGCA TTCAAAGGAC CTGAATACCG GTGAAGACGA CTATCTGAAG CAGCATCAGG CGCAGCCAGG CCAGCAATGG CAGGGTGACC CAATCGGCGA TCGTCGGCGC GCGGGTGCCG CAGACGATGC TCAAACCGCA GGCGTCGTCG ATCGGTTGAC GAAGATGGGC TGGTCGAAGG AGCAGGCCGC TGGTCTGGCG GCCAACTTCT GGCAAGAGAG CCTGTTCAAT CCTAATGCTG TAGGTGACAA CGGCCACGCA TATGGCATCG GACAGTGGCA TGAAGATCGG CAGGCTGAAT TCAAGAAGCT GTTCGGCACC GACATCCGTA AGTCGACGCT GGACCAGCAG CTTCAATTCG CGGATTACGA GCTGCGCCGC GGCAACGAAC AGAAGGCAGG GCGCGCGCTG ATGGGCGCGT CTTCGGCGCA GGACGCCGGC AGCATCGTGT CGCGTCTGTA CGAGCGCCCG GCCGATGCGG CAGGCGAAGC GGCGCGGCGC GGCCAGATGG CGGCGGCGAT AGACGGCAAG GTTCACGTGC ACGTCGACAT TCCGAACGCT CCGCCGGGCA CGAAAGCATC AGTGCGCGCT AGCGGCGGCG CAACCGCGTC GGCACGCGTC GGCACATCGA ACGTTATTGG ACCATCGGTA TGA
|
Protein sequence | MAASTPFVVT ITAVDKATAS VQKIKASLAS VTKPASDLKA SFASFSKEAG LDRVAKSMKS VGTAAADTAR QVASVITPLT TIAGIGSIAG IALLANEWGK FGAEVQRTSG VLGVSTQDLQ AFRGAAKLAG LSADDMTGSL KSLGRTIEDA TYGRNQDALV MMQKFGITLH RTKDGAVDAT RALKEVANAI VAQKGNVQAQ GLIAGAFGVE SLLPLLQKGE KGIDEFVNRA RSMGLVFDDK QLARGQQFNE NMLKLEASAT RLKYSFGDAL APAVQRVLDV VGRLVDKYGD VVASKVSEYV EKFANWIDHV DWDKTTSEIG KFVDAIGGVK GIAIAIAAIS FAGPIASVLS LISNLTLLAT TTVPTAVAAL ARLAGGPIMA AVLALLHSKD LNTGEDDYLK QHQAQPGQQW QGDPIGDRRR AGAADDAQTA GVVDRLTKMG WSKEQAAGLA ANFWQESLFN PNAVGDNGHA YGIGQWHEDR QAEFKKLFGT DIRKSTLDQQ LQFADYELRR GNEQKAGRAL MGASSAQDAG SIVSRLYERP ADAAGEAARR GQMAAAIDGK VHVHVDIPNA PPGTKASVRA SGGATASARV GTSNVIGPSV
|
| |