| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1844 |
|---|
| Symbol | |
|---|
| ID | 6243333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2108321 |
|---|
| End bp | 2109049 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642593631 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001858069 |
|---|
| Protein GI | 186476599 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000000808903 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGGTG ACGTTGCGCA TTCAACCAGA TCAATTTCAT TCATGCACGG AGTATCTTTG
CCCACGAGTC CACCGTCGCG TCGGCGGCCC AAGCAGGCGC GCGCCGAATT CGCGCTCGAC
AGCATTCTGG AAGCCGCTGC CCGCACGCTC GAAGCGCATG GTAAAGCAGG GCTGACGACA
CAGCGTGTCG CCGATACGGC GGGTTTCAGT ATCGGCGCGA TCTATCAGTA CTTTCCGAAC
AAGGAAGGCT TGATCGAAGC GCTTGCACGA CGCGAGCTCG AACGCCTGAC GGCGATGATG
AAAGAGGCAC TCACCCAGCC GGCGCCGTTC GGCACGGGGC TCAACGCGCG CCGCATCATG
CGCGTGGTGG CGGCGTTCAT CGGCGACCGG CCACGCCTTT ACGGCATCTT GCGCGCGGAG
TGGGCAGAAG CCGCGCCCGA TACGCCAGTC GGACAGGGCA TGCGGCGCTA CTTTGAATTG
ATTGCGGGCA CGCTGAACCG GGAGAGTCCT GAGCTGGGCA AGCGGGTCGG TAGCGACGAA
GCGCGCTTCG TGCTGTTTCG CGCGATTTCC GGCGTGCTGC TTGCCACGGC GCAGGAGCGT
CCGCATTACT TCGGCACCGA CGCCTTCGAA GACGAAATGG TGCGCCTGAT TCTCGGCTTT
CTGAACTACG ACCTGAGCCA GGACATGCCG CGCCTCGCGC GAGAGGGTGA CAGTTTTACA
AGCGCGTGA
|
|---|
| Protein sequence | MRGDVAHSTR SISFMHGVSL PTSPPSRRRP KQARAEFALD SILEAAARTL EAHGKAGLTT
QRVADTAGFS IGAIYQYFPN KEGLIEALAR RELERLTAMM KEALTQPAPF GTGLNARRIM
RVVAAFIGDR PRLYGILRAE WAEAAPDTPV GQGMRRYFEL IAGTLNRESP ELGKRVGSDE
ARFVLFRAIS GVLLATAQER PHYFGTDAFE DEMVRLILGF LNYDLSQDMP RLAREGDSFT
SA
|
|---|
| |