Gene Bphy_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1841 
Symbol 
ID6243330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2106778 
End bp2107428 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content65% 
IMG OID642593628 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001858066 
Protein GI186476596 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000006365 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTCTTT CTCTTCAGCA ATTCGCAATG GTCGCGGGCG CGCATCTGCT TGCGCTGCTC 
AGCCCAGGTC CGGACTTCTT TCTGATCGCA CGCAGCGCGC TGTTGCGCGG ATGGCGTAAG
ACGGGCGCCG TATGCTTCGG CATCGCCTGC GCGAATGGCG TGTTCATTGC ACTCGCGCTC
GGCGGTGTGG CCGCGCTGCA TCGGCACGGC ACCGCGTTCG CGCTCGTCCA GGCGGCAGGC
TGCGTGTATC TGTTCTATCT GGGCGGATTG ATGCTGCGGC ATGCCAGAGC CGCGTCGATC
GGCACGCACG GTCAGGATCG CACTTCCGCG CCAACGGCAA GCGCCTGGCT TGCACGCTTT
GCCACAGGCT TCGCCTCCGC GATTCTCAAT CCGAAGAACG CGCTCTTCTA TGCCAGCCTG
TTCGCGTTGC TCGCGGCTCG CGACGCGCCC TTCGGCGCAC AGATCGTCTA CGGCGCGTGG
ATGTTCGTGG CCGTGTTCGG CTGGGATCTG CTCGTGGCAA TGAGCATCGG ACATCCGGCT
GTCGTCGCGC GCTTCACGCG CCACAGCGCG TCGATCGAGC GCGTGACGGG CGCCGTATTG
CTCGCGATCG CAGCAAGCGT GCTGGCGATG CTCGCGCGCC AGTGGTTATG A
 
Protein sequence
MGLSLQQFAM VAGAHLLALL SPGPDFFLIA RSALLRGWRK TGAVCFGIAC ANGVFIALAL 
GGVAALHRHG TAFALVQAAG CVYLFYLGGL MLRHARAASI GTHGQDRTSA PTASAWLARF
ATGFASAILN PKNALFYASL FALLAARDAP FGAQIVYGAW MFVAVFGWDL LVAMSIGHPA
VVARFTRHSA SIERVTGAVL LAIAASVLAM LARQWL