Gene Bphy_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1828 
Symbol 
ID6243318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2088429 
End bp2089781 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content65% 
IMG OID642593617 
ProductNADH dehydrogenase 
Protein accessionYP_001858055 
Protein GI186476585 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.813496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00233776 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGA TCGATCGACA CACCGCAAGC AGCACACGCA CTGCGCCACA CCGGATCGTC 
ATCGTTGGCG GCGGCGTGGG TGGACTGGGA CTCGCGACGC GTCTTGGCGA ATCGCTCGGC
AAGAGCGGAC ATGCGCAAGT CGTGCTGGTG GACCGCTCGC CGACACACTT CTGGAAGCCG
CTGTTGCACG AAGCCGCCTC CGGCCAGATC GACCCCGCCA CGCATCAGCT GCAATATGCG
GTGCAGGCAC GTCGTCACGG CTTTGCGTTC GAACAGGGCG CGCTGCAATC GCTCGATCGC
GCGCAGCATC GCATCACGAT CAGCGCGACG CGCGACGAAG ACGGCCGCGA CGTATTGCCC
GCGCGTCACA TCGAGTTCGA CACCCTCGTG CTCGCACTCG GCAGCGTGAC GAACTACTTC
GGCGTGAAAG GTGCGGCGGA CCATGCGCTG CCGCTCGAGT CCGTCACACA TGCGGAATCG
TTCCGACGCA AGCTGCTCGA TGCGTGCACG CGAGCAAACC ACGTGCGGCG CGTGAGCGGC
GCGCAGCAGG TGCAGCCGGT GTCGATCAAC ATCATCGGTG CGGGCGCGAC AGGCGTCGAG
CTCGCGGCCG CTTTGCGCGA CAGCATCCGT TTGATGCATC GCTATAGCCT CTTTGCACTC
GACCCGGAGC GCGATTTCTG CATTCGCCTG ATCGAAGGCA CGGATCGCGT GTTGCCCGCG
CTGTCGCAGC GCGTTTCCAT GCGTGCGCGG CGGATGCTGA GCGGCCTCGG CGTCGACGTG
CTGACGACTA CGCGCGTGAC AGAAGTGCGC GCCGACGCTG TCTGGACGCA CGACGGTCAG
CAACTGCCCA ACGATATCGC GATCTGGACA GCAGGCATCG CCGGGCCGCC TGTGTTGCGC
GTGCTCGACG GCATCGAGGT GAACCGCAAC GCACAAGTGC TCGTGAGCCG CACGCTGCAA
ACCACGACGG ATGAAAACGT CTTCGCATTG GGCGATTGCG CAGCCTGCCC TTCGCACGCG
GATGGCTTCC TCGCACCACG CGCGCAGGTC GCGCATCAAC AGGCGACGTT TCTCGCGCGT
GCGTTGAAGT GCCGTGTCGG CGGCGAAGCG CTGCCCGAGT TCACGTATCG CGACGCGGGC
ACGCTGGTCG GTTTCGGCGA CGTCGGCACG ATCGGCAGTC TGAGCGGCTT GCGTGAACGG
CCCGTGTTCG TCGATGGCTG GCTCGCCACC ATCGTGTACC GGCTGATCTA TCGCCGGCAC
ATGATGACCG TCAGCGGTTT TGCGCGCATG GCGCTTGATA CGGCGAGTCA TTGGCTGCGT
CGCCGCGTGC ATCCCGTGAT CCGGCTGCAC TGA
 
Protein sequence
MTTIDRHTAS STRTAPHRIV IVGGGVGGLG LATRLGESLG KSGHAQVVLV DRSPTHFWKP 
LLHEAASGQI DPATHQLQYA VQARRHGFAF EQGALQSLDR AQHRITISAT RDEDGRDVLP
ARHIEFDTLV LALGSVTNYF GVKGAADHAL PLESVTHAES FRRKLLDACT RANHVRRVSG
AQQVQPVSIN IIGAGATGVE LAAALRDSIR LMHRYSLFAL DPERDFCIRL IEGTDRVLPA
LSQRVSMRAR RMLSGLGVDV LTTTRVTEVR ADAVWTHDGQ QLPNDIAIWT AGIAGPPVLR
VLDGIEVNRN AQVLVSRTLQ TTTDENVFAL GDCAACPSHA DGFLAPRAQV AHQQATFLAR
ALKCRVGGEA LPEFTYRDAG TLVGFGDVGT IGSLSGLRER PVFVDGWLAT IVYRLIYRRH
MMTVSGFARM ALDTASHWLR RRVHPVIRLH