Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1823 |
Symbol | |
ID | 6243313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2081556 |
End bp | 2082815 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642593612 |
Product | major facilitator transporter |
Protein accession | YP_001858050 |
Protein GI | 186476580 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0410288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCC GTCCAATGGT CAACGCACGC AGTCTCCGCG CCCTCGACTG GCTCAACTTT TTCGTCGCCA ACGTGCAGAC GGGGTTCGGG CCGTTCATTG CCTCCTATCT CGCGACGCAC AAGTGGACGC AGGGCGAGAT CGGCCTCGCC CTTTCTATCG GCACGATCAG CGCGATGGTG AGCCAGGTGC CCGGCGGTGC CGCCGTCGAT GCGTTGCGCA ACAAGAAGGG AGCCGCCGCC TGGGCGATTA TCGCGATCAT TCTGAGTGCG GTGCTGCTCG CGGCGAGCCC GACCGTGCTG CCCGTGATGG CCGCCGAGGT CTTCCACGGC TTCGCGAGCT GCATGCTCGT ACCGGCGATG GCGGCTATTT CGTTCGCGCT GGTCGGACGC CAGGATCTTG GTGACCGGCT GGGACGCAAC GCGCGCTGGG CGTCCATAGG CAGCGCCGTC GCCGCGGGCT TGATGGGCCT GTTCGGCGAA TACTTCTCGG CGCGCGCGGT GTTCTGGCTG ACGGCGGCGC TGGCGGCACC GGCGCTGATC GCGCTGTCGA TGATCACGAT GCCTGCGCAC CATCACGCGC CGGCGCACAA GCCCGCGAAG AAGGAGCACG ATGAAGCCGA AGAGAAGGAA TCGATCTTCG AGTTGCTGCG CGACCGGCGC ATGCTGATAT TCGCGGCGTG CGTGGTGCTG TTCCACCTGT CGAACGCGGC GATGCTGAAC CTCGCGGCGG GCGAAGTGAC GGCGGGCATG GGGGACAACG TGCAGCTCGT GATTGCTGCT TGCATCATCG TGCCGCAGGC GATCGTTGCG ATGCTGTCGC CGTGGGTCGG GCGCACTGCG GAGCGCTGGG GACGTCGGCC GATCCTGTTG CTCGGGTTCT CTGCGCTACC GTTGCGGGCG CTGTTGTTTG CGGGCGTGAG CAGCCCGTAT CTGCTTGTGC CTGTGCAGAT GCTCGATGGG CTCAGCGCGG CTGTGTTCGG TGTGATGTTG CCGCTGATCG CGGCGGATGT GGCCGGCGGC AAGGGGCGCT ACAACCTGAC GATCGGGCTG TTTGGTTTGG CCGCCGGGAT TGGTGCAACG CTGTCTACTG CCGTTGCCGG GTTTATTGCC GATCGCTTTG GCAGTGCTGT TAGCTTTTTT GGACTCGCCG GTGCGGGGGC GCTCGCTGTG TTGCTTGTTT GGGCTGCCAT GCCCGAAACC AGGGATGCGG GGCGTAGTTT GGAGGAGCCT GCACCCGAGG CTTTGAAGCG GGCTGAGTGA
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Protein sequence | MTSRPMVNAR SLRALDWLNF FVANVQTGFG PFIASYLATH KWTQGEIGLA LSIGTISAMV SQVPGGAAVD ALRNKKGAAA WAIIAIILSA VLLAASPTVL PVMAAEVFHG FASCMLVPAM AAISFALVGR QDLGDRLGRN ARWASIGSAV AAGLMGLFGE YFSARAVFWL TAALAAPALI ALSMITMPAH HHAPAHKPAK KEHDEAEEKE SIFELLRDRR MLIFAACVVL FHLSNAAMLN LAAGEVTAGM GDNVQLVIAA CIIVPQAIVA MLSPWVGRTA ERWGRRPILL LGFSALPLRA LLFAGVSSPY LLVPVQMLDG LSAAVFGVML PLIAADVAGG KGRYNLTIGL FGLAAGIGAT LSTAVAGFIA DRFGSAVSFF GLAGAGALAV LLVWAAMPET RDAGRSLEEP APEALKRAE
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